Publications
Find out more about Species Management Research Program through our publications. Browse the entire list below or by specific topics at the links below.
Filter Total Items: 664
From IgZ to IgT: A call for a common nomenclature for immunoglobulin heavy chain genes of ray-finned fish From IgZ to IgT: A call for a common nomenclature for immunoglobulin heavy chain genes of ray-finned fish
No abstract available.
Authors
Alex Dornburg, Tatsuya Ota, Michael F. Criscitiello, Irene Salinas, J. Oriol Sunyer, Susana Magadan, Pierre Boudinot, Zhen Xu, Martin F Flajnik, Amy Singer, Francisco Gambon-Deza, John Hansen, Jeffrey A Yoder
Birds not in flight: Using camera traps to observe ground use of birds at a wind-energy facility Birds not in flight: Using camera traps to observe ground use of birds at a wind-energy facility
Context: Camera trapping is increasingly used to collect information on wildlife occurrence and behaviour remotely. Not only does the technique provide insights into habitat use by species of interest, it also gathers information on non-target species. Aims: We implemented ground-based camera trapping to investigate the behaviours of ground-dwelling birds, a technique that has largely...
Authors
Shellie R. Puffer, Laura A. Tennant, Jeffrey E. Lovich, Mickey Agha, Amanda L. Smith, David Delaney, Terence R. Arundel, Leo J. Fleckenstein, Jessica Briggs, Andrew Walde, Joshua Ennen
Dam removal and river restoration Dam removal and river restoration
The removal of dams from rivers has become a common and widespread practice in the United States and Europe. Although often initiated by factors like economics and safety, ecosystem restoration is often a desired benefit and outcome of dam removal. We describe the physical and ecological effects that the placement and removal of dams have on rivers. We then focus on the drivers of dam...
Authors
Jeffrey J. Duda, J. Ryan Bellmore
Oil and gas reclamation on US public lands: How it works and improving the process with land potential concepts Oil and gas reclamation on US public lands: How it works and improving the process with land potential concepts
• There are three general stages of a well's life on US public land: 1) the permitting process to drill, 2) active extraction of fossil fuel resource, and 3) plugging and abandonment of well. • There is no national standard for oil and gas reclamation in the United States similar to mining and therefore current reclamation practices and standards fail to achieve long-term effectiveness...
Authors
Sean Di Stefano, Jason W. Karl, Michael C. Duniway, Robert Heinse, April Hulet, J.D. Wulfhorst
Effects of stocking density on stress response and susceptibility to infectious hematopoietic necrosis virus in rainbow trout Effects of stocking density on stress response and susceptibility to infectious hematopoietic necrosis virus in rainbow trout
The goals of this study were to examine the effect of stocking density on the stress response and disease susceptibility in juvenile rainbow trout (Oncorhynchus mykiss). Fish were sorted into one of 2 stocking densities (high density "HD", 20-40 kg/m3) or (low density, "LD", 4-8 kg/m3) and 3 stress indices (cortisol levels in serum and water, and neutrophil: lymphocyte (N:L) ratios from...
Authors
Jenna J Klug, Piper M Treuting, George E. Sanders, James Winton, Gael Kurath
Behavior and movement of smallmouth bass (Micropterus dolomieu) in the forebay of Bonneville Dam, Columbia River, August–December 2020 Behavior and movement of smallmouth bass (Micropterus dolomieu) in the forebay of Bonneville Dam, Columbia River, August–December 2020
A telemetry study was conducted during August–December 2020 to evaluate behavior and movement patterns of adult smallmouth bass (Micropterus dolomieu) in the forebay of Bonneville Dam, Washington. A total of 40 smallmouth bass were collected, tagged, and released during August–September in seven distinct areas of the dam forebay and monitored until mid-December. Movement data from 36...
Authors
Tobias J. Kock, Gabriel S. Hansen, Scott D. Evans
Ontogeny of eDNA shedding during early development in Chinook Salmon (Oncorhynchus tshawytscha) Ontogeny of eDNA shedding during early development in Chinook Salmon (Oncorhynchus tshawytscha)
Knowledge of the timing of major life history events in aquatic species is important for informing conservation and resource management planning. Accordingly, surveys of environmental DNA (eDNA) have been performed to determine the efficacy of eDNA for providing information on life history events, primarily focusing on the timing of events associated with spawning, and these studies have...
Authors
Carl O. Ostberg, Dorothy M. Chase
Avian predation of juvenile Lost River and Shortnose Suckers in Upper Klamath Lake: An assessment of Sucker assisted rearing program releases during 2018–2020 Avian predation of juvenile Lost River and Shortnose Suckers in Upper Klamath Lake: An assessment of Sucker assisted rearing program releases during 2018–2020
To bolster recruitment in Endangered Species Act (ESA) listed Lost River Suckers (Deltistes luxatus) and Shortnose Suckers (Chasmistes brevirostris) in the Upper Klamath Basin (UKB), the U.S. Fish and Wildlife Service (USFWS) and its partners have implemented the Sucker Assisted Rearing Program (SARP). As part of this program, juvenile suckers were reared in captivity, implanted with...
Authors
Allen Evans, Quinn Payton, Nathan V Banet, Bradley M. Cramer, Caylen Kelsey, David A. Hewitt
miR133b microinjection during early development targets transcripts of sardiomyocyte ion channels and induces oil-like cardiotoxicity in zebrafish (Danio rerio) embryos miR133b microinjection during early development targets transcripts of sardiomyocyte ion channels and induces oil-like cardiotoxicity in zebrafish (Danio rerio) embryos
Previous studies have shown that altered expression of a family of small noncoding RNAs (microRNAs, or miRs) regulates the expression of downstream mRNAs and is associated with diseases and developmental disorders. miR133b is highly expressed in mammalian cardiac and skeletal muscle, and aberrant expression is associated with cardiac disorders and electrophysiological changes in...
Authors
Justin Blaine Greer, Jason T. Magnuson, Victoria McGruer, Le Qian, Subham Dasgupta, David C. Volz, Daniel Schlenk
Monitoring native, resident nonsalmonids for the incidence of gas bubble trauma downstream of Snake and Columbia River Dams, 2021 Monitoring native, resident nonsalmonids for the incidence of gas bubble trauma downstream of Snake and Columbia River Dams, 2021
In 2020, a new spill program was implemented to aid the downstream passage of juvenile salmonids at mainstem dams on the Snake and Columbia rivers. Under this program, the total dissolved gas (TDG) cap was increased to 125% and monitoring of native, resident nonsalmonid (NRN) fishes for gas bubble trauma (GBT) became a requirement. The primary objective of this work was to measure the
Authors
Kenneth Tiffan, Collin Smith, Nicole Joy Eller, Joe J. Warren
Behavior and survival of hatchery rainbow trout (Oncorhynchus mykiss) in the upper Cowlitz River Basin, Washington, 2013 and 2017 Behavior and survival of hatchery rainbow trout (Oncorhynchus mykiss) in the upper Cowlitz River Basin, Washington, 2013 and 2017
A two-year study (2013 and 2017) was conducted to determine if annual releases of hatchery rainbow trout (resident Oncorhynchus mykiss) in the upper Cowlitz River Basin, Washington adversely affected anadromous fish in the basin. Rainbow trout tagged with radio transmitters were monitored after release to describe movement patterns, entrainment rates at Cowlitz Falls Dam, and survival
Authors
Amy C. Hansen, Tobias J. Kock, Brian K. Ekstrom, Theresa L. Liedtke
Water quality, instream habitat, and the distribution of suckers in the upper Lost River watershed of Oregon and California, summer 2018 Water quality, instream habitat, and the distribution of suckers in the upper Lost River watershed of Oregon and California, summer 2018
Executive Summary Endangered Lost River (Deltistes luxatus) and shortnose (Chasmistes brevirostris) suckers primarily use lotic habitats during the spring spawning season in the Upper Klamath Lake watershed. However, summer-time surveys of the upper Lost River watershed in 1972, 1975 and 1989–90 indicated that adults of both endangered species use tributaries of Clear Lake Reservoir...
Authors
Barbara A. Martin, Summer M. Burdick, Stephen T. Staiger, Caylen M. Kelsey