Publications

We studied some of the relationships between federally listed fall Chinook Salmon, Oncorhynchus tshawytscha, endemic Sand Roller, Percopsis transmontana, and non-native Smallmouth Bass, Micropterus dolomieu, in Lower Granite Reservoir on the Snake River. Because of its recent reappearance and population increase, the Sand Rollers could be filling the role of a “native invader” in the...

We report here the genome sequences of two index strains of Pacific salmon paramyxovirus isolated in 1982 and 1983 from adult salmon in Oregon. The isolates are most closely related to Atlantic salmon paramyxovirus, the type species of the genus Aquaparamyxovirus, but are sufficiently distinct to be considered two genotypes of a novel species.

Viral hemorrhagic septicemia virus (VHSV), a fish rhabdovirus belonging to the Novirhabdovirus genus, causes severe disease and mortality in many marine and freshwater fish species worldwide. VHSV isolates are classified into four genotypes and each group is endemic to specific geographic regions in the north Atlantic and Pacific Oceans. Most viruses in the European VHSV genotype Ia are...

Atlantic salmon farming is one of the largest aquaculture sectors in the world. A major impact on farm economics, fish welfare, and potentially nearby wild salmonid populations, is the sea louse ectoparasite Lepeophtheirus salmonis. Sea louse infestations are most often controlled through application of chemicals, but in most farming regions sea lice have evolved resistance to the small...

Scientific study of raptors often requires the use of a lure to capture individuals for marking or collecting various data and samples. Live lure owls in the genus Bubo are commonly used with mist nets or dho-gazas to trap nesting raptors, but the use of these live lures presents ethical, logistical, and financial challenges. Although owls mounted by taxidermists and mechanical owls have...

Obtaining inferences on disease dynamics (e.g., host population size, pathogen prevalence, transmission rate, host survival probability) typically requires marking and tracking individuals over time. While multistate mark–recapture models can produce high‐quality inference, these techniques are difficult to employ at large spatial and long temporal scales or in small remnant host...

Insect pollinators are critically important for maintaining U.S. food production and ecosystem health. The upper Midwest is home to more than 40 percent of all U.S. honey bee colonies and is considered by many beekeepers to be America’s last beekeeping refuge. Beekeepers come to this region because their honey bees require high-quality grassland and bee-friendly agricultural crops to...

A field study was conducted to estimate survival of fry-sized juvenile Chinook salmon (Oncorhynchus tshawytscha) in Lookout Point Reservoir, western Oregon, during 2017. The field study consisted of releasing three groups of genetically marked fish in the reservoir and monthly fish sampling. Fish were released during April 18–19 (43,950 fish), May 30–June 2 (44,145 fish), and on June 28...

Executive Summary The recovery of endangered Lost River suckers (Deltistes luxatus) in Upper Klamath Lake, south-central Oregon, has been impeded because juveniles are not recruiting into adult spawning populations. Adult sucker populations spawn each spring but mortality of age-0 suckers during their first summer is excessively high, and recruitment of juveniles into adult populations...

In theory parameters of dynamic N-mixture models can be estimated with multiple years of data without the robust design under the assumption of constant detection probability. However, such an assumption can rarely be met in long-term studies, and the consequences of violating this assumption in the inferences of dynamic N-mixture models have not been assessed. In this study we used...

Infectious hematopoietic necrosis virus (IHNV) is a well-known rhabdoviral pathogen of salmonid fish. In this study, a comprehensive analysis of 40 IHNV viruses isolated from thirteen fish farms in nine geographically dispersed Chinese provinces during 2012 to 2017 is presented. Identity of nucleotide and amino acid sequences among all the complete glycoprotein (G) genes from Chinese...

Large‐scale citizen‐science projects, such as atlases of species distribution, are an important source of data for macroecological research, for understanding the effects of climate change and other drivers on biodiversity, and for more applied conservation tasks, such as early‐warning systems for biodiversity loss.However, citizen‐science data are challenging to analyse because the...