Code for Multiple Population Viability Analysis of egg mass time series from the Foothill Yellow-legged Frogs (Rana boylii) in California
July 18, 2023
Code to fit a Multiple Population Viability Analysis (MPVA) to time series of Foothill yellow-legged frog (Rana boylii) egg mass counts.
Rose, J.P., and Halstead, B.J., 2023, Code for Multiple Population Viability Analysis of egg mass time series from the Foothill Yellow-legged Frogs (Rana boylii) in California: U.S. Geological Survey software release, https://doi.org/10.5066/P9QWX2GR.
This code reproduces the analyses presented in the following paper:
Rose JP, Kupferberg SJ, Peek RA, Ashton D, Bettaso JB, Bobzien S, Bourque RM, Breedveld KGH, Catenazzi A, Drennan JE, Gonsolin E, Grefsrud M, Herman AE, House MR, Kluber MR, Lind AJ, Marlow KR, Striegle A, van Hattem M, Wheeler CA, Wilcox JT, Wiseman KD, Halstead BJ. 2023. Identifying drivers of population dynamics for an imperiled stream breeding amphibian using time series of egg mass counts. Ecosphere DOI forthcoming upon publication
Rose, J.P., and Halstead, B.J., 2023, Code for Multiple Population Viability Analysis of egg mass time series from the Foothill Yellow-legged Frogs (Rana boylii) in California: U.S. Geological Survey software release, https://doi.org/10.5066/P9QWX2GR.
This code reproduces the analyses presented in the following paper:
Rose JP, Kupferberg SJ, Peek RA, Ashton D, Bettaso JB, Bobzien S, Bourque RM, Breedveld KGH, Catenazzi A, Drennan JE, Gonsolin E, Grefsrud M, Herman AE, House MR, Kluber MR, Lind AJ, Marlow KR, Striegle A, van Hattem M, Wheeler CA, Wilcox JT, Wiseman KD, Halstead BJ. 2023. Identifying drivers of population dynamics for an imperiled stream breeding amphibian using time series of egg mass counts. Ecosphere DOI forthcoming upon publication
Citation Information
Publication Year | 2023 |
---|---|
Title | Code for Multiple Population Viability Analysis of egg mass time series from the Foothill Yellow-legged Frogs (Rana boylii) in California |
DOI | 10.5066/P9QWX2GR |
Authors | Jonathan P Rose, Brian J Halstead |
Product Type | Software Release |
Record Source | USGS Asset Identifier Service (AIS) |
USGS Organization | Western Ecological Research Center - Headquarters |
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Identifying drivers of population dynamics for a stream breeding amphibian using time series of egg mass counts
The decline in amphibian populations is one of the starkest examples of the biodiversity crisis. For stream breeding amphibians, alterations to natural flow regimes by dams, water diversions, and climate change have been implicated in declines and extirpations. Identifying drivers of amphibian declines requires long time series of abundance data because amphibian populations can exhibit...
Authors
Jonathan P. Rose, Sarah J. Kupferberg, Ryan A. Peek, Don Ashton, James B. Bettaso, Steven Bobzien, Ryan M. Bourque, Koen G.H. Breedveld, Alessandro Catenazzi, Joseph E. Drennan, Earl Gonsolin, Marcia Grefsrud, Andrea E. Herman, Matthew R. House, Matt R. Kluber, Amy J. Lind, Karla R. Marlow, Alan Striegle, Michael G. van Hattem, Clara A. Wheeler, Jeffery T. Wilcox, Kevin D. Wiseman, Brian Halstead
Related
Identifying drivers of population dynamics for a stream breeding amphibian using time series of egg mass counts
The decline in amphibian populations is one of the starkest examples of the biodiversity crisis. For stream breeding amphibians, alterations to natural flow regimes by dams, water diversions, and climate change have been implicated in declines and extirpations. Identifying drivers of amphibian declines requires long time series of abundance data because amphibian populations can exhibit...
Authors
Jonathan P. Rose, Sarah J. Kupferberg, Ryan A. Peek, Don Ashton, James B. Bettaso, Steven Bobzien, Ryan M. Bourque, Koen G.H. Breedveld, Alessandro Catenazzi, Joseph E. Drennan, Earl Gonsolin, Marcia Grefsrud, Andrea E. Herman, Matthew R. House, Matt R. Kluber, Amy J. Lind, Karla R. Marlow, Alan Striegle, Michael G. van Hattem, Clara A. Wheeler, Jeffery T. Wilcox, Kevin D. Wiseman, Brian Halstead