Publications
Read publications and other informational products to learn more about USGS science occurring in the Mississippi Basin.
Filter Total Items: 5565
Mapping stream and floodplain geomorphometry with the Floodplain and Channel Evaluation Tool Mapping stream and floodplain geomorphometry with the Floodplain and Channel Evaluation Tool
Broad-scale mapping of stream channel and floodplain geomorphic metrics is critical to improve the understanding of geomorphic change, biogeochemical processes, riverine habitat quality, and opportunities for management intervention. The Floodplain and Channel Evaluation Tool (FACET) was developed to provide an open-source tool for automated processing of digital elevation models (DEMs)...
Authors
Kristina G. Hopkins, Labeeb Ahmed, Peter R. Claggett, Samuel Lamont, Marina J. Metes, Gregory E. Noe
Survival and growth of juvenile mussels in an outdoor pond after 28-day laboratory exposure to aqueous zinc Survival and growth of juvenile mussels in an outdoor pond after 28-day laboratory exposure to aqueous zinc
The extent to which effects seen in chronic toxicity studies in the laboratory affect mussel fitness later in life is poorly known. We examined juvenile Fatmucket (Lampsilis siliquoidea) survival and growth for 56 d following exposure to Zn in a laboratory bioassay. We conducted a 28-d chronic toxicity bioassay with 6-wk-old juvenile mussels exposed to a control and two Zn treatments...
Authors
Jeffery A. Steevens, James L. Kunz, Ning Wang, Christopher M. Barnhart, Serena Ciparis
CGS: Coupled growth and survival model with cohort fairness CGS: Coupled growth and survival model with cohort fairness
Fish modeling in complex environments is critical for understanding drivers of population dynamics in aquatic systems. This paper proposes a Bayesian network method for modeling fish survival and growth over multiple connected rivers. Traditional fish survival models capture the effect of multiple environmental drivers (e.g., stream temperature, stream flow) by adding different variables...
Authors
Erhu He, Yue Wan, Benjamin Letcher, Jennifer H. Fair, Yiquin Xie, Xiaowei Jia
The founding charter of the Omic Biodiversity Observation Network (Omic BON) The founding charter of the Omic Biodiversity Observation Network (Omic BON)
Omic BON is a thematic Biodiversity Observation Network under the Group on Earth Observations Biodiversity Observation Network (GEO BON), focused on coordinating the observation of biomolecules in organisms and the environment. Our founding partners include representatives from national, regional, and global observing systems; standards organizations; and data and sample management...
Authors
Raissa Meyer, Neil Davies, Kathleen J. Pitz, Christopher Meyer, Robyn Samuel, Jane Anderson, Ward Appeltans, Katharine Barker, Francisco P. Chavez, J. Emmett Duffy, Kelly D. Goodwin, Maui Hudson, Margaret Hunter, Johannes Karstensen, Christine M. Laney, Margaret Leinen, Paula Mabee, James A. Macklin, Frank Muller-Karger, Nicolas Pade, Jay Pearlman, Lori Phillips, Pieter Provoost, Ioulia Santi, Dmitry Schigel, Lynn M. Schriml, Alice Soccodato, Saara Suominen, Katherine M. Thibault, Visotheary Ung, Jodie van de Kamp, Elycia Wallis, Ramona Walls, Pier Luigi Buttigieg
Confirmation of significant sea turtle nesting activity on a remote island chain in the Gulf of Mexico Confirmation of significant sea turtle nesting activity on a remote island chain in the Gulf of Mexico
Globally, six of the seven sea turtle species are threatened or endangered and as such, monitoring reproductive activity for these species is necessary for effective population recovery. Remote beaches provide a challenge to conducting these surveys, which often results in data gaps that can hamper management planning. Throughout the summer of 2022, aerial surveys were conducted over the
Authors
Margaret Lamont, Dianne Ingram, Todd Baker, Matt Weigel, Brian M. Shamblin
Genetic analysis of federally endangered Cape Sable seaside sparrow subpopulations in the Greater Everglades, USA Genetic analysis of federally endangered Cape Sable seaside sparrow subpopulations in the Greater Everglades, USA
The federally endangered Cape Sable seaside sparrow (Ammospiza maritima mirabilis) is endemic to the Greater Everglades ecosystem in southern Florida, inhabiting fragmented marl prairies in six individual subpopulations. The subspecies is threatened by loss of breeding habitat from fire and water management. Genetic information is severely limited for the subspecies but could help inform...
Authors
Caitlin Beaver, Thomas Virzi, Margaret Hunter
A global biodiversity observing system to unite monitoring and guide action A global biodiversity observing system to unite monitoring and guide action
The rate and extent of global biodiversity change is surpassing our ability to measure, monitor and forecast trends. We propose an interconnected worldwide system of observation networks — a global biodiversity observing system (GBiOS) — to coordinate monitoring worldwide and inform action to reach international biodiversity targets.
Authors
Andrew Gonzalez, Petteri Vihervaara, Patricia Balvanera, Amanda E. Bates, Elisa Bayraktarov, Peter J. Bellingham, Andreas Bruder, Jillian Campbell, Michael D. Catchen, Jeannine Cavender-Bares, Jonathan Chase, Nicholas Coops, Mark J. Costello, Maria Dornelas, Gregoire Dubois, Emmett J. Duffy, Hilde Eggermont, Nestor Fernandez, Simon Ferrier, Gary N. Geller, Michael J. Gill, Dominique Gravel, Carlos A. Guerra, Robert P. Guralnick, Michael Harfoot, Tim Hirsch, Sean M. Hoban, Alice C. Hughes, Margaret Hunter, Forest Isbell, Walter Jetz, Norbert Juergens, W. Daniel Kissling, Cornelia B. Krug, Yvan Le Bras, Brian Leung, Maria C. Londoño-Murcia, Jean-Michel Lord, Michel Loreau, Amy Luers, Keping Ma, Anna J. MacDonald, Melodie McGeoch, Katie L. Millette, Zsolt Molnar, Akira S. Mori, Frank E. Muller-Karger, Hiroyuki Muraoka, Laetitia M. Navarro, Tim Newbold, Aidin Niamir, David Obura, Mary O’Connor, Marc Paganini, Henrique M. Pereira, Timothee Poisot, Laura J. Pollock, Andy Purvis, Adriana Radulovici, Duccio Rocchini, Michael E. Schaepman, Gabriela Schaepman-Strub, Dirk S. Schmeller, Ute Schmiedel, Fabien D. Schneider, Mangal M. Shakya, Andrew K Skidmore, Andrew L. Skowno, Yayoi Takeuchi, Mao-Ning Tuanmu, Eren Turak, Woody Turner, Mark C. Urban, Nicolas Urbina-Cardona, Ruben Valbuena, Basile van Havre, Elaine Wright
A Monte-Carlo chemical budget approach to assess ambient groundwater flow in bedrock open boreholes A Monte-Carlo chemical budget approach to assess ambient groundwater flow in bedrock open boreholes
In low-permeability rocks, ambient groundwater flow in open boreholes may go undetected using conventional borehole-flowmeter tools and alternative approaches may be needed to identify flow. Understanding ambient flow in open boreholes is important for tracking of cross contamination in groundwater. Chlorinated volatile organic compound (CVOC) concentrations from three open boreholes set...
Authors
Philip Harte
The Government eDNA Working Group 6th Annual eDNA Technical Exchange Workshop The Government eDNA Working Group 6th Annual eDNA Technical Exchange Workshop
The 6th annual Environmental DNA (eDNA) Technical Exchange Workshop was a virtual workshop hosted and coordinated by the Government eDNA Working Group (GEDWG) on January 24–26, 2023. GEDWG is a no-cost consortium that focuses on bringing together stakeholders associated with federal, state, provincial, municipal, and other government and non-government agencies interested in eDNA and...
Authors
Carol A. Stepien, Richard F. Lance, Katy E. Klymus, Margaret Hunter
Perspectives on the scientific legacy of J. Philip Grime Perspectives on the scientific legacy of J. Philip Grime
Perhaps as much as any other scientist in the 20th century, J.P. Grime transformed the study of plant ecology and helped shepherd the field toward international prominence as a nexus of ideas related to global environmental change. Editors at the Journal of Ecology asked a group of senior plant ecologists to comment on Grime's scientific legacy.This commentary piece includes individual...
Authors
Jason D. Fridley, Xiaojuan Liu, Natalia Perez-Harguindeguy, F. Stuart Chapin III, Mick Crawley, Gerlinde De Deyn, Sandra Diaz, James Grace, Peter Grubb, Susan P. Harrison, Sandra Lavorel, Zhimin Liu, Simon Pierce, Bernhard Schmid, Carly J. Stevens, David A. Wardle, Mark Westoby
Trace elements and consequent ecological risks in mining- influenced streams of Appalachia Trace elements and consequent ecological risks in mining- influenced streams of Appalachia
Appalachian coal surface mines fracture geologic materials, causing release of both major ions and trace elements to water via accelerated weathering. When elevated above natural background, trace elements in streams may produce adverse effects to biota via direct exposure from water and sediment and via dietary exposure in food sources. Other studies have found elevated water...
Authors
Elyse V. Clark, David J. Soucek, Stephen H. Schoenholtz, Keridwen M. Whitmore, Carl E. Zipper
Integrating remote sensing with ground-based observations to quantify the effects of an extreme freeze event on black mangroves (Avicennia germinans) at the landscape scale Integrating remote sensing with ground-based observations to quantify the effects of an extreme freeze event on black mangroves (Avicennia germinans) at the landscape scale
Climate change is altering the frequency and intensity of extreme weather events. Quantifying ecosystem responses to extreme events at the landscape scale is critical for understanding and responding to climate-driven change but is constrained by limited data availability. Here, we integrated remote sensing with ground-based observations to quantify landscape-scale vegetation damage from...
Authors
Melinda Martinez, Michael Osland, James B. Grace, Nicholas Enwright, Camille Stagg, Simen Kaalstad, Gordon Anderson, Anna R. Armitage, Just Cebrian, Karen L. Cummins, Richard Day, Donna J. Devlin, Kenneth H. Dunton, Laura Feher, Alejandro Fierro-Cabo, Elena A. Flores, Andrew From, A. Randall Hughes, David A. Kaplan, Amy K. Langston, Christopher J. Miller, Charles E. Proffitt, Nathan G.F. Reaver, Colt R. Sanspree, Caitlin M. Snyder, Andrew P. Stetter, Kathleen M. Swanson, Jamie E. Thompson, Carlos Zamora-Tovar