The Sacramento-San Joaquin Delta (Delta) is home to a diverse community of plants and animals and is the hub of California’s freshwater delivery system. The Delta supplies water for over 25 million Californians and supports millions of acres of farming, commercial and sport fishing, shipping and ports, and recreational boating.
Invasive aquatic vegetation (IAV) – dominated by Brazilian waterweed, water hyacinth, and water primrose – has increased exponentially in recent years, clogging about 17,400 acres of waterways across the Delta. These invasive plants create safety hazards for boaters, and obstruct navigation channels, marinas, and irrigation systems.
These aquatic plants also act as "ecosystem engineers", altering water flows through the Delta, water temperature, and the amount of oxygen and nutrients in the water. IAV also affects how sediment in Delta water is transported. Sediment affects how clear or cloudy the water is – how "turbid" it is. Reductions in turbidity may be impacting the quality of fish habitat. Adequate turbidity levels are required for proper feeding of endangered fish such as Delta smelt – which, because of environmental protections, affects water management and water deliveries to farmers and communities. In addition, IAV may be blocking deposition of sediment (accretion) across marsh plains. Sediment accretion is essential to protect marshes against predicted sea-level rise.
Total eradication of these invasive plants from Delta waterways is unlikely because they have spread too widely.
Objective
The purpose of this project is to provide critical information about the impact of invasive aquatic vegetation on fish habitat and the health of marshes to agencies that manage and control IAV in the Delta, including the California Department of Fish and Wildlife, Division of Boating and Waterways, and Department of Water Resources.
We will accomplish this goal by measuring the impact of invasive aquatic vegetation on sediment transport, turbidity, and marsh accretion rates in the three environments of the Delta: channels, dead-end sloughs, and flooded islands. This study will be the first of its kind to address these research questions in a quantitative fashion.
Science Plan
We hypothesize that (1) IAV is reducing turbidity to such an extent that it is affecting the quality of fish habitat in the Delta and (2) IAV is blocking the delivery of sediment, which is needed to maintain marsh elevation as sea-level continues to rise.
In the first year of this three-year study we will refine our methods for quantifying sediment trapping by IAV. To do this, we'll measure the sediment trapping ability of vegetation during both winter and summer in a range of IAV patches, choosing those that best resemble invasive Delta species assemblages and patch sizes. We will use two different approaches for sampling: (1) measurements along transects landward and seaward from IAV patches using boat-mounted acoustic Doppler current profilers and (2) fixed instrument deployments using a combination of Doppler velocimeters and short-range acoustic current profilers, both within and outside of patches.
In addition, we will also measure both short (14-day period) and long-term (past 50-100 years) sediment accretion in marshes both adjacent and distant from IAV patches. These measurements will be used along with Delta-wide remote-sensing data showing the distribution of IAV to estimate the total amount of sediment trapped by IAV in the Delta (the sediment sink). This sediment sink estimate will be compared to past and current measurements of suspended sediment concentrations in Delta channels to quantify the role of IAV in the recent decline in turbidity throughout the Delta. In addition, the sediment sink estimate will be compared to sedimentation rates in marsh soils to determine whether sediment deposition in marshes has declined concurrently with the exponential increase in IAV.
Below are data or web applications associated with this project.
Radioisotopes, percent organic carbon, percent inorganic sediment, and bulk density for peat and sediment cores collected in the Sacramento-San Joaquin Delta, California
Sediment transport and aquatic vegetation data from three locations in the Sacramento-San Joaquin Delta, California, 2017 to 2018
Sediment Concentration and Velocity Data to Assess Trapping by Submerged Vegetation
Below are publications associated with this project.
Influence of invasive submerged aquatic vegetation (E. densa) on currents and sediment transport in a freshwater tidal system
We present a field study combining measurements of vegetation density, vegetative drag, and reduction of suspended-sediment concentration (SSC) within patches of the invasive submerged aquatic plant Egeria densa. Our study was motivated by concern that sediment trapping by E. densa, which has proliferated in the Sacramento–San Joaquin Delta, is impacting marsh accretion and reducing turbidity. In
Carbon storage and sediment trapping by Egeria densa Planch., a globally invasive, freshwater macrophyte
Trapping of suspended sediment by submerged aquatic vegetation in a tidal freshwater region: Field observations and long-term trends
- Overview
The Sacramento-San Joaquin Delta (Delta) is home to a diverse community of plants and animals and is the hub of California’s freshwater delivery system. The Delta supplies water for over 25 million Californians and supports millions of acres of farming, commercial and sport fishing, shipping and ports, and recreational boating.
Invasive water primrose (Ludwigia species) and water hyacinth (Eichhornia crassipes) line the marsh edge in Mandeville Cut near the Port of Stockton, California’s third largest port. (Public domain.) Invasive aquatic vegetation (IAV) – dominated by Brazilian waterweed, water hyacinth, and water primrose – has increased exponentially in recent years, clogging about 17,400 acres of waterways across the Delta. These invasive plants create safety hazards for boaters, and obstruct navigation channels, marinas, and irrigation systems.
These aquatic plants also act as "ecosystem engineers", altering water flows through the Delta, water temperature, and the amount of oxygen and nutrients in the water. IAV also affects how sediment in Delta water is transported. Sediment affects how clear or cloudy the water is – how "turbid" it is. Reductions in turbidity may be impacting the quality of fish habitat. Adequate turbidity levels are required for proper feeding of endangered fish such as Delta smelt – which, because of environmental protections, affects water management and water deliveries to farmers and communities. In addition, IAV may be blocking deposition of sediment (accretion) across marsh plains. Sediment accretion is essential to protect marshes against predicted sea-level rise.
Total eradication of these invasive plants from Delta waterways is unlikely because they have spread too widely.
Invasive aquatic vegetation chokes Lindsey Slough, creating a potentially challenging environment for fish and other aquatic life. The slough is the site of a 2014 restoration project in the Sacramento-San Joaquin Delta to improve freshwater tidal marsh and spawning habitat for Delta smelt and other fish. (Public domain.) Objective
The purpose of this project is to provide critical information about the impact of invasive aquatic vegetation on fish habitat and the health of marshes to agencies that manage and control IAV in the Delta, including the California Department of Fish and Wildlife, Division of Boating and Waterways, and Department of Water Resources.
We will accomplish this goal by measuring the impact of invasive aquatic vegetation on sediment transport, turbidity, and marsh accretion rates in the three environments of the Delta: channels, dead-end sloughs, and flooded islands. This study will be the first of its kind to address these research questions in a quantitative fashion.
Science Plan
We hypothesize that (1) IAV is reducing turbidity to such an extent that it is affecting the quality of fish habitat in the Delta and (2) IAV is blocking the delivery of sediment, which is needed to maintain marsh elevation as sea-level continues to rise.
In the first year of this three-year study we will refine our methods for quantifying sediment trapping by IAV. To do this, we'll measure the sediment trapping ability of vegetation during both winter and summer in a range of IAV patches, choosing those that best resemble invasive Delta species assemblages and patch sizes. We will use two different approaches for sampling: (1) measurements along transects landward and seaward from IAV patches using boat-mounted acoustic Doppler current profilers and (2) fixed instrument deployments using a combination of Doppler velocimeters and short-range acoustic current profilers, both within and outside of patches.
Landscape ecologist Shruti Khanna uses a threshing rake to collect Brazilian waterweed (Egeria densa) in the Delta. The USGS is conducting research to measure the impact of invasive aquatic vegetation on sediment transport, turbidity, and marsh accretion rates in Delta. (Public domain.) In addition, we will also measure both short (14-day period) and long-term (past 50-100 years) sediment accretion in marshes both adjacent and distant from IAV patches. These measurements will be used along with Delta-wide remote-sensing data showing the distribution of IAV to estimate the total amount of sediment trapped by IAV in the Delta (the sediment sink). This sediment sink estimate will be compared to past and current measurements of suspended sediment concentrations in Delta channels to quantify the role of IAV in the recent decline in turbidity throughout the Delta. In addition, the sediment sink estimate will be compared to sedimentation rates in marsh soils to determine whether sediment deposition in marshes has declined concurrently with the exponential increase in IAV.
- Data
Below are data or web applications associated with this project.
Radioisotopes, percent organic carbon, percent inorganic sediment, and bulk density for peat and sediment cores collected in the Sacramento-San Joaquin Delta, California
This data release contains data from cores collected in marshes and in sediments under invasive Brazilian waterweed (Egeria densa Planchon) in the Sacramento-San Joaquin Delta of California during the spring of 2018. Data are provided in two text files in comma separated columns. The first Core_Sites_Details.txt contains core site location, collection dates, and naming information. The second fileSediment transport and aquatic vegetation data from three locations in the Sacramento-San Joaquin Delta, California, 2017 to 2018
We measured currents, suspended-sediment concentration (SSC), bed sediment characteristics, and vegetation biomass density in the Sacramento-San Joaquin Delta in 2017-2018, as part of a project investigating the influence of invasive aquatic vegetation (IAV) on flow and sediment flux. This data release includes data from three sites: Lindsey Slough (April 2017), Middle River (March 2018) and the lSediment Concentration and Velocity Data to Assess Trapping by Submerged Vegetation
The acoustic Doppler current meter (ADCP) used in this study outputs binary data files containing measurement scheme, location, time, velocity, backscatter, boat heading, depth, and other parameters. These data are provided here in the manufacturer's "classic ASCII" format, as described in READMEforADCP.txt file associated with this data release. We also collected water samples for suspended-sedim - Multimedia
- Publications
Below are publications associated with this project.
Influence of invasive submerged aquatic vegetation (E. densa) on currents and sediment transport in a freshwater tidal system
We present a field study combining measurements of vegetation density, vegetative drag, and reduction of suspended-sediment concentration (SSC) within patches of the invasive submerged aquatic plant Egeria densa. Our study was motivated by concern that sediment trapping by E. densa, which has proliferated in the Sacramento–San Joaquin Delta, is impacting marsh accretion and reducing turbidity. In
Carbon storage and sediment trapping by Egeria densa Planch., a globally invasive, freshwater macrophyte
Invasive plants have long been recognized for altering ecosystem properties, but their long-term impacts on ecosystem processes remain largely unknown. In this study, we determined the impact of Egeria densa Planch, a globally invasive freshwater macrophyte, on sedimentation processes in a large tidal freshwater region. We measured carbon accumulation (CARs) and inorganic sedimentation rates in suTrapping of suspended sediment by submerged aquatic vegetation in a tidal freshwater region: Field observations and long-term trends
Widespread invasion by non-native, submerged aquatic vegetation (SAV) may modify the sediment budget of an estuary, reducing the availability of inorganic sediment required by marshes to maintain their position in the tidal frame. The instantaneous trapping rate of suspended sediment in SAV patches in an estuary has not previously been quantified via field observations. In this study, flows of wat