Computational Tools and Services

Autonomous Underwater Vehicles (AUVs) are instruments that collect water-quality, depth, and other data in waterbodies. They produce complex and massive datasets. There is currently no standard method to store, organize, process, quality-check, analyze, or visualize this data. The Waterbody Rapid Assessment Tool (WaterRAT) is aPython application that processes and displays water-quality...

In the mid-1800s, tile-drains were installed in poorly-drained soils of topographic lows as water management to protect cropland during wet conditions; consequently, estimations of tile-drain location have been based on soil series. Most tile drains are in the Midwest, however each state has farms with tile and tile-drain density has increased in the last decade. Where tile drains...

Understanding and anticipating change in dynamic Earth systems is vital for societal adaptation and welfare. USGS possesses the multidisciplinary capabilities to anticipate Earth systems change, yet our work is often bound within a single discipline and/or Mission Area. The proposed work breaks new ground in moving USGS towards an interdisciplinary predictive modeling framework. We are...

Wildfires affect streams and rivers when they burn vegetation and scorch the ground. This makes floods more likely to happen and reduces water quality. Public managers, first responders, fire scientists, and hydrologists need timely information before and after a fire to plan for floods and water treatment. This project will create a method to combine national fire databases with the...

The cloud offers new and exciting opportunities for USGS employees to leverage computing resources and services that can quickly improve their workflows and reduce expenditures typically associated with establishing a comparable environment with physical infrastructure. However, due to the novelty of access to and use of the cloud environment, there is limited documentation and shared...

Increasingly, USGS scientists seek to share and collaborate while working on data and code. Furthermore, these scientists often require advanced computing resources. Jupyter Notebooks are one such tool for creating these workflows. The files are interactive, code “notebooks” which allow users to combine code and text in one document, enabling scientists to share the stories held within...

Rangeland systems are some of our nation’s largest providers of agro-ecological services, sustaining plant productivity that is highly variable across seasons and years. Although the ability to predict the upcoming growing season’s rangeland productivity would have enormous economic and management value – such as for making decisions about cattle stocking rates, fire, restoration, and...

Computational models are important tools that aid process understanding, hypothesis testing, and data interpretation. The ability to easily couple models from various domains such as, surface-water and groundwater, to form integrated models will aid studies in water resources. This project investigates the use of the Community Surface Dynamics Modeling System (CSDMS) Modeling Framework...

The goal of this project was to maximize the value of expensive animal tagging data. We developed an interactive web application to help scientists understand patterns in their own tagging datasets and to help scientists, funders and agencies communicate tagging data to decision-makers and to the general public. Interactive visualizations have emerged recently as a valuable tool for...

Geochronological data provide essential information necessary for understanding the timing of geologic processes and events, as well as quantifying rates and timescales key to geologic mapping, mineral and energy resource and hazard assessments. The USGS’s National Geochronological Database (NGDB) contains over 30,000 radiometric ages, but no formal update has occurred in over 20 years...

We developed an Internet of Things (IoT) prototype and associated cloud infrastructure for camera-based data collection and initial processing of river streamflow using the cloud (fig. 1). This pilot successfully created a hardware and cloud infrastructure to collect and upload video from a camera gage at San Pedro Creek in San Antonio, Texas. Using a ThingLogix Foundry instance in the...

Advances in information technology now provide large volume, high-frequency data collection which may improve real-time biosurveillance and forecasting. But, big data streams present challenges for data management and timely analysis. As a first step in creating a data science pipeline for translating large datasets into meaningful interpretations, we created a cloud-hosted PostgreSQL...