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Publications

This is a list of publications written by Patuxent employees since Patuxent opened in 1939.  To search for Patuxent's publications by author or title, please click below to go to the USGS Publication Warehouse.

Filter Total Items: 8128

Evolution of pathogen virulence across space during an epidemic Evolution of pathogen virulence across space during an epidemic

We explore pathogen virulence evolution during the spatial expansion of an infectious disease epidemic in the presence of a novel host movement trade-off, using a simple, spatially explicit mathematical model. This work is motivated by empirical observations of the Mycoplasma gallisepticum invasion into North American house finch (Haemorhous mexicanus) populations; however, our results...
Authors
Erik E. Osnas, Paul J. Hurtado, Andrew P. Dobson

Small mammal use of native warm-season and non-native cool-season grass forage fields Small mammal use of native warm-season and non-native cool-season grass forage fields

Recent emphasis has been put on establishing native warm-season grasses for forage production because it is thought native warm-season grasses provide higher quality wildlife habitat than do non-native cool-season grasses. However, it is not clear whether native warm-season grass fields provide better resources for small mammals than currently are available in non-native cool-season...
Authors
Ryan L Klimstra, Christopher E. Moorman, Sarah J. Converse, J. Andrew Royle, Craig A Harper

Catalog of type specimens of recent mammals: orders Didelphimorpha through Chiroptera (Excluding Rodentia) in the National Museum of Natural History, Smithsonian Institution Catalog of type specimens of recent mammals: orders Didelphimorpha through Chiroptera (Excluding Rodentia) in the National Museum of Natural History, Smithsonian Institution

The type collection of Recent Mammals in the Division of Mammals, National Museum of Natural History, Smithsonian Institution, contains 820 specimens bearing names of 809 species-group taxa of Didelphimorphia through Chiroptera, excluding Rodentia, as of June 2014. This catalog presents an annotated list of these holdings comprised of 788 holotypes, 26 lectotypes, 11 syntypes (22...
Authors
Robert D. Fisher, Craig A. Ludwig

Likelihood analysis of spatial capture-recapture models for stratified or class structured populations Likelihood analysis of spatial capture-recapture models for stratified or class structured populations

We develop a likelihood analysis framework for fitting spatial capture-recapture (SCR) models to data collected on class structured or stratified populations. Our interest is motivated by the necessity of accommodating the problem of missing observations of individual class membership. This is particularly problematic in SCR data arising from DNA analysis of scat, hair or other material...
Authors
J. Andrew Royle, Christopher S. Sutherland, Angela K. Fuller, Catherine C. Sun

Medea genes, handedness and other traits Medea genes, handedness and other traits

Medea factors or genes are maternal-effects mechanisms, found in many species, in which the mother's body selectively kills embryos of a certain genotype.Humans have a similar genetic mechanism, the gene RHD which produces Rh-factor involved in blood type.Recently I proposed that RHD acts as a maternal-effects gene that determines handedness (i.e., right handed or non-right handed) in...
Authors
Jeffrey Hatfield

Mapping migratory flyways in Asia using dynamic Brownian bridge movement models Mapping migratory flyways in Asia using dynamic Brownian bridge movement models

Background Identifying movement routes and stopover sites is necessary for developing effective management and conservation strategies for migratory animals. In the case of migratory birds, a collection of migration routes, known as a flyway, is often hundreds to thousands of kilometers long and can extend across political boundaries. Flyways encompass the entire geographic range between...
Authors
E.C. Palm, S. H. Newman, Diann J. Prosser, Xiangming Xiao, Ze Luo, Nyambayar Batbayar, Sivananinthaperumal Balachandran, John Y. Takekawa

An open-population hierarchical distance sampling model An open-population hierarchical distance sampling model

Modeling population dynamics while accounting for imperfect detection is essential to monitoring programs. Distance sampling allows estimating population size while accounting for imperfect detection, but existing methods do not allow for direct estimation of demographic parameters. We develop a model that uses temporal correlation in abundance arising from underlying population dynamics...
Authors
Rachel Sollmann, Beth Gardner, Richard B Chandler, J. Andrew Royle, T Scott Sillett

An investigation into the Swan Island Honduras collecting event of Tiaporus fuliginosus Cope (Reptilia: Teiidae) and its systematic status An investigation into the Swan Island Honduras collecting event of Tiaporus fuliginosus Cope (Reptilia: Teiidae) and its systematic status

Confusion exists in the literature concerning the collecting event of the teiid lizard Tiaporus fuliginosus. We investigated the literature and documents stored at the Smithsonian Institution Archives involving the collector of those specimens in an effort to resolve that confusion. We conclude that the type series was collected on the Swan Islands of Honduras by Charles H. Townsend...
Authors
James R. McCranie, Steve W. Gotte

Morphological divergence in a continental adaptive radiation: South American ovenbirds of the genus Cinclodes Morphological divergence in a continental adaptive radiation: South American ovenbirds of the genus Cinclodes

Cinclodes is an ecologically diverse genus of South American passerine birds and represents a case of continental adaptive radiation along multiple axes. We investigated morphological diversification in Cinclodes using a comprehensive set of morphometric measurements of study skins. Principal component analysis identified 2 primary axes of morphological variation: one describing body...
Authors
Jonathan A. Rader, Michael E. Dillon, R. Terry Chesser, Pablo Sabat, Carlos Martinez del Rio

Sequential decision making in computational sustainability via adaptive submodularity Sequential decision making in computational sustainability via adaptive submodularity

Many problems in computational sustainability require making a sequence of decisions in complex, uncertain environments. Such problems are generally notoriously difficult. In this article, we review the recently discovered notion of adaptive submodularity, an intuitive diminishing returns condition that generalizes the classical notion of submodular set functions to sequential decision...
Authors
Andreas Krause, Daniel Golovin, Sarah J. Converse

Investigating endocrine and physiological parameters of captive American kestrels exposed by diet to selected organophosphate flame retardants Investigating endocrine and physiological parameters of captive American kestrels exposed by diet to selected organophosphate flame retardants

Organophosphate triesters are high production volume additive flame retardants (OPFRs) and plasticizers. Shown to accumulate in abiotic and biotic environmental compartments, little is known about the risks they pose. Captive adult male American kestrels (Falco sparverius) were fed the same dose (22 ng OPFR/g kestrel/d) daily (21 d) of tris(2- butoxyethyl) phosphate (TBOEP), tris(2...
Authors
KJ Fernie, V. Palace, L. Peters, Niladri Basu, R. J. Letcher, Natalie K. Karouna-Renier, Sandra L. Schultz, Rebecca S. Lazarus, Barnett A. Rattner

Wintering movements and habitat use of Surf Scoter (Melanitta perspicillata) in the mid-Atlantic U.S. Wintering movements and habitat use of Surf Scoter (Melanitta perspicillata) in the mid-Atlantic U.S.

Wintering habitat use and migratory pathways are key issues facing sea ducks in the mid-Atlantic U.S. and elsewhere due to the potential for offshore wind energy development. A comprehensive understanding of important winter habitats and environmental characteristics determining sea duck abundance and distribution is paramount in advising marine spatial planning efforts in the region and
Authors
Dustin Meattey, Lucas Savoy, Andrew Gilbert, Jeffrey Tash, Carrie E. Gray, Alicia Berlin, Christine Lepage, Scott Gilliland, Timothy D. Bowman, Jason Osenkowsi, Caleb Spiegel
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