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Publications

Below is a list of WERC's peer-reviewed publications. If you are searching for a specific publication and cannot find it in this list, please contact werc_web@usgs.gov

Filter Total Items: 3735

Uncloaking a cryptic, threatened rail with molecular markers: origins, connectivity and demography of a recently-discovered population Uncloaking a cryptic, threatened rail with molecular markers: origins, connectivity and demography of a recently-discovered population

The threatened California Black Rail lives under dense marsh vegetation, is rarely observed, flies weakly and has a highly disjunct distribution. The largest population of rails is found in 8–10 large wetlands in San Francisco Bay (SF Bay), but a population was recently discovered in the foothills of the Sierra Nevada Mountains (Foothills), within a wetland network comprised of over 200...
Authors
Philippe Girard, John Y. Takekawa, Steven R. Beissinger

Scale-dependent associations of Band-tailed Pigeon counts at mineral sites Scale-dependent associations of Band-tailed Pigeon counts at mineral sites

The abundance of Band-tailed Pigeons (Patagioenas fasciata monilis) has declined substantially from historic numbers along the Pacific Coast. Identification of patterns and causative factors of this decline are hampered because habitat use data are limited, and temporal and spatial variability patterns associated with population indices are not known. Furthermore, counts are influenced...
Authors
Cory T. Overton, Michael L. Casazza, Peter S. Coates

Migration of waterfowl in the east asian flyway and spatial relationship to HPAI H5N1 outbreaks Migration of waterfowl in the east asian flyway and spatial relationship to HPAI H5N1 outbreaks

Poyang Lake is situated within the East Asian Flyway, a migratory corridor for waterfowl that also encompasses Guangdong Province, China, the epicenter of highly pathogenic avian influenza (HPAI) H5N1. The lake is the largest freshwater body in China and a significant congregation site for waterfowl; however, surrounding rice fields and poultry grazing have created an overlap with wild...
Authors
John Y. Takekawa, S. H. Newman, X. Xiao, D.J. Prosser, K.A. Spragens, E.C. Palm, B. Yan, T. Li, F. Lei, D. Zhao, David C. Douglas, S.B. Muzaffar, W. Ji

Wild animals Wild animals

No abstract available.
Authors
Erin E. Boydston

Population structure and relatedness among female Northern Pintails in three California wintering regions Population structure and relatedness among female Northern Pintails in three California wintering regions

Female Northern Pintails (Anas acuta) were sampled in California's three main Central Valley wintering regions (Sacramento Valley, Suisun Marsh, San Joaquin Valley) during September–October before most regional movements occur and microsatellite and mitochondrial DNA were analyzed to examine population structure and relatedness. Despite reportedly high rates of early-fall pairing and...
Authors
Joseph P. Fleskes, Ada C. Fowler, Michael L. Casazza, John M. Eadie

The inverse niche model for food webs with parasites The inverse niche model for food webs with parasites

Although parasites represent an important component of ecosystems, few field and theoretical studies have addressed the structure of parasites in food webs. We evaluate the structure of parasitic links in an extensive salt marsh food web, with a new model distinguishing parasitic links from non-parasitic links among free-living species. The proposed model is an extension of the niche...
Authors
Christopher P. Warren, Mercedes Pascual, Kevin D. Lafferty, Armand M. Kuris

Changes in the status of harvested rice fields in the Sacramento Valley, California: Implications for wintering waterfowl. Changes in the status of harvested rice fields in the Sacramento Valley, California: Implications for wintering waterfowl.

Harvested rice fields provide critical foraging habitat for wintering waterfowl in North America, but their value depends upon post-harvest treatments. We visited harvested ricefields in the Sacramento Valley, California, during the winters of 2007 and 2008 (recent period) and recorded their observed status as harvested (standing or mechanically modified stubble), burned, plowed, or...
Authors
Michael R. Miller, Jay D. Garr, Peter S. Coates

Lesions and behavior associated with forced copulation of juvenile Pacific harbor seals (Phoca vitulina richardsi) by southern sea otters (Enhydra lutris nereis) Lesions and behavior associated with forced copulation of juvenile Pacific harbor seals (Phoca vitulina richardsi) by southern sea otters (Enhydra lutris nereis)

Nineteen occurrences of interspecific sexual behavior between male southern sea otters (Enhydra lutris nereis) and juvenile Pacific harbor seals (Phoca vitulina richardsi) were reported in Monterey Bay, California, between 2000 and 2002. At least three different male sea otters were observed harassing, dragging, guarding, and copulating with harbor seals for up to 7 d postmortem...
Authors
Heather S. Harris, Stori C. Oates, Michelle M. Staedler, M. Tim Tinker, David A. Jessup, James T. Harvey, Melissa A. Miller

Bat guano virome: Predominance of dietary viruses from insects and plants plus novel mammalian viruses Bat guano virome: Predominance of dietary viruses from insects and plants plus novel mammalian viruses

Bats are hosts to a variety of viruses capable of zoonotic transmissions. Because of increased contact between bats, humans, and other animal species, the possibility exists for further cross-species transmissions and ensuing disease outbreaks. We describe here full and partial viral genomes identified using metagenomics in the guano of bats from California and Texas. A total of 34% and...
Authors
Linlin Li, G. Victoria Joseph, Chunlin Wang, Morris Jones, Gary M. Fellers, Thomas H. Kunz, Eric Delwart

Demographic studies of Joshua trees in Mojave Desert National Parks: demography with emphasis on germination and recruitment Demographic studies of Joshua trees in Mojave Desert National Parks: demography with emphasis on germination and recruitment

The study of population change with regard to reproduction, seed dispersal, and germination, establishment, growth, and survival/mortality is known as demography. Demographic studies provide managers with information to assess future trends on the density, distribution, health, and population changes of importance or value, including Joshua trees (Yucca brevifolia). Demographic research...
Authors
T. C. Esque, B. Reynolds, L.A. DeFalco, B.A. Waitman

Climatic water deficit, tree species ranges, and climate change in Yosemite National Park Climatic water deficit, tree species ranges, and climate change in Yosemite National Park

Aim  (1) To calculate annual potential evapotranspiration (PET), actual evapotranspiration (AET) and climatic water deficit (Deficit) with high spatial resolution; (2) to describe distributions for 17 tree species over a 2300-m elevation gradient in a 3000-km2 landscape relative to AET and Deficit; (3) to examine changes in AET and Deficit between past (c. 1700), present (1971–2000) and...
Authors
James A. Lutz, Jan W. Van Wagtendonk, Jerry F. Franklin

Fishing out marine parasites? Impacts of fishing on rates of parasitism in the ocean Fishing out marine parasites? Impacts of fishing on rates of parasitism in the ocean

Among anthropogenic effects on the ocean, fishing is one of the most pervasive and extends deepest into the past. Because fishing reduces the density of fish (reducing transmission efficiency of directly transmitted parasites), selectively removes large fish (which tend to carry more parasites than small fish), and reduces food web complexity (reducing transmission efficiency of...
Authors
Chelsea L. Wood, Kevin D. Lafferty, Fiorenza Micheli
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