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Publications

Below is a list of WERC's peer-reviewed publications. If you are searching for a specific publication and cannot find it in this list, please contact werc_web@usgs.gov

Filter Total Items: 3706

Rice cultivation supports growth and survival of a threatened semi-aquatic reptile Rice cultivation supports growth and survival of a threatened semi-aquatic reptile

Integration of agroecosystems and other working landscapes with protected lands and waters is critical to the conservation of Earth's biodiversity. Rice agroecosystems support many species by providing aquatic habitat where natural wetlands have been altered or drained. In regions with long dry seasons, rice fields and associated irrigation canals provide essential habitat for wetland...
Authors
Jonathan P. Rose, Allison M. Nguyen, Anna Jordan, Daniel Antonio Macias, Elliot James Schoenig, Giancarlo Ray Napolitano, Richard Kim, Julia S.M. Ersan, Alexandria M. Fulton, Brian Halstead

Causal analysis of fire regime drivers in California Causal analysis of fire regime drivers in California

Background Understanding the relative contribution of climate and human factors to wildfires is critical for managing risk across California’s diverse ecosystems, in the United States (US).Aims We propose a model that distinguishes between proximate and ultimate drivers of fire regimes and apply it to a century of fire and climate data to assess regional variation in causal mechanisms...
Authors
Jon Keeley, Alexandra D. Syphard

Range-wide population trend analysis for greater sage-grouse (Centrocercus urophasianus)—Updated 1960–2024 Range-wide population trend analysis for greater sage-grouse (Centrocercus urophasianus)—Updated 1960–2024

Greater sage-grouse (Centrocercus urophasianus; hereafter sage-grouse) are at the center of State and national land-use policies largely because of their unique life-history traits as an ecological indicator for the health of sagebrush ecosystems. This updated population trend analysis provides State and Federal land and wildlife managers with the best available science to help guide...
Authors
Brian G. Prochazka, Peter S. Coates, Cameron L. Aldridge, Michael S. O’Donnell, David R. Edmunds, Adrian P. Monroe, Steve E. Hanser, Lief A. Wiechman, Michael P. Chenaille

Phylogenomics of endangered troglobiotic rove beetles (Coleoptera: Staphylinidae: Pselaphinae) from central Texas karst regions Phylogenomics of endangered troglobiotic rove beetles (Coleoptera: Staphylinidae: Pselaphinae) from central Texas karst regions

The karst habitats of central Texas, USA, are home to an array of endemic subterranean-obligate (troglobiotic) invertebrates. This includes several species of rove beetles (Coleoptera: Staphylinidae: Pselaphinae). Here we developed a molecular dataset using sequence capture of Ultra-Conserved Elements (UCEs) from the Coleoptera-UCE-1.1 K v1 baits kit. These data were used to assess...
Authors
Perry L. Wood, Donald S. Chandler, Nicholas S. Gladstone, Anna Mitelberg, Julia G. Smith, Kemble White, Jenny Wilson, Amy G. Vandergast

Occurrence and surface availability of Siskiyou Mountains Salamanders (Plethodon stormi) and Scott Bar Salamanders (P. asupak) in northern California Occurrence and surface availability of Siskiyou Mountains Salamanders (Plethodon stormi) and Scott Bar Salamanders (P. asupak) in northern California

Estimating the distributions of cryptic species is essential for conservation, yet our understanding is hampered by animal behavior and imperfect detection. We developed and implemented a multiscale occupancy survey protocol to estimate the probability of occurrence, probability of being active on the surface, and detection probability of two range-restricted terrestrial salamanders...
Authors
Brian Halstead, Daniel Antonio Macias, Casey D. Moss, Patrick M. Kleeman, Jonathan P. Rose

Climatological effects on survival, recruitment, and possible extirpation of a Sierra Nevada anuran Climatological effects on survival, recruitment, and possible extirpation of a Sierra Nevada anuran

The drivers of population dynamics are a primary interest of ecologists, and predicting the consequences of climate variability on wildlife populations benefits from an understanding of how weather causes variation in the vital rates of populations. Given recent and projected extremes in annual precipitation in the Sierra Nevada of California, USA, including two severe droughts, we...
Authors
Brian Halstead, Patrick M. Kleeman, Jonathan P. Rose, Robert L. Grasso, Gary M. Fellers

Precipitation timing mediates life-stage and population-level associations with climate for an indicator species Precipitation timing mediates life-stage and population-level associations with climate for an indicator species

Global climate change is contributing to declines in biodiversity, although changes vary across geographic regions and species. The iconic greater sage-grouse (Centrocercus urophasianus; sage-grouse) is central to conservation within the North American sagebrush ecosystem, yet its vulnerability to climate effects remains poorly understood. We used hierarchical models to explore weather...
Authors
Shawn T. O’Neil, Carl Gregory Lundblad, Brianne E. Brussee, John Christopher Tull, Michael L. Casazza, Justin R. Small, Cameron L. Aldridge, Peter S. Coates

The Southwestern Pond Turtle (Actinemys pallida) in Baja California, Mexico: New localities and persistent threats The Southwestern Pond Turtle (Actinemys pallida) in Baja California, Mexico: New localities and persistent threats

The Southwestern Pond Turtle (Actinemys pallida), the only native freshwater turtle in Baja California, is experiencing alarming population declines, echoing global patterns observed in freshwater turtles. We conducted comprehensive field surveys across the major drainages of northwestern Baja California to delineate the species' current distribution, identify critical threats to its...
Authors
Jorge H. Valdez-Villavicencio, Anny Peralta-García, Bradford D. Hollingsworth, Patricia Galina-Tessaro, Robert D. Fisher, Jeff A. Alvarez, R. A. Lara-Resendiz

Does tidal marsh restoration lead to the recovery of trophic pathways that support estuarine fishes? Does tidal marsh restoration lead to the recovery of trophic pathways that support estuarine fishes?

Evaluation of tidal marsh restoration success is typically based on the recovery of habitat size and target species. However, food-web structure may provide valuable insight into ecosystem functioning trajectories. Here, we studied restored tidal marshes of different ages (new, young, old; spanning 1–150 years) in comparison with nearby reference sites along the San Francisco Estuary. We...
Authors
Megan D. Pagliaro, Susan E.W. De La Cruz, Isa Woo, Jake Sousa, Natalie Rich, Lenny Grimaldo, Denise Colombano, Albert Ruhí

Longevity, age-specific survival, and mean generation time of Rana muscosa: Implications for conservation of possibly the longest lived Ranid frog Longevity, age-specific survival, and mean generation time of Rana muscosa: Implications for conservation of possibly the longest lived Ranid frog

Life history strategies vary widely among species and play a vital role in extinction risk, especially in a rapidly changing environment. For many taxa, information on life history such as longevity, lifespan, and generation time is incomplete. This is especially true for amphibians, which have experienced large-scale declines in recent decades. The mountain yellow-legged frog (Rana...
Authors
Cynthia Joan Hitchcock, Adam R. Backlin, Amanda Renee Goldberg, Sarah Kay Thomsen, Erin L. Muths, Elizabeth Gallegos, Robert D. Fisher

Genetic and environmental factors associated with survival of a rare songbird in a fragmented urban landscape Genetic and environmental factors associated with survival of a rare songbird in a fragmented urban landscape

The coastal Cactus Wren (Campylorhynchus brunneicapillus) persists in small and fragmented populations throughout southern California that are subject to genetic drift and inbreeding. We combined individual banding and resighting data and genotyped individuals at 22 microsatellite loci to assess whether heterozygosity was associated with survival across three regional Cactus Wren...
Authors
Amy G. Vandergast, Anna Mitelberg, Barbara E. Kus, Kristine L. Preston, Suellen Lynn, Alexandra Houston, Robert C. Klinger

Sequoia and Sequoiadendron: Two paleoendemic megatrees with markedly different adaptive responses to recent high-severity fires Sequoia and Sequoiadendron: Two paleoendemic megatrees with markedly different adaptive responses to recent high-severity fires

Premise Coast redwood (Sequoia sempervirens) and giant sequoia (Sequoiadendron giganteum) are two iconic paleoendemic species with limited distributions, well known for their spectacular size. Recently, they have been exposed to high-severity crown fires, with starkly contrasting responses.Methods We used all available published literature and field observations to understand the...
Authors
Jon Keeley, Juli G. Pausas
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