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Publications

Below is a list of WERC's peer-reviewed publications. If you are searching for a specific publication and cannot find it in this list, please contact werc_web@usgs.gov

Filter Total Items: 3745

Reference genome of an iconic lizard in western North America, Blainville’s horned lizard Phrynosoma blainvillii Reference genome of an iconic lizard in western North America, Blainville’s horned lizard Phrynosoma blainvillii

Genome assemblies are increasingly being used to identify adaptive genetic variation that can help prioritize the population management of protected species. This approach may be particularly relevant to species like Blainville’s horned lizard, Phrynosoma blainvillii, due to its specialized diet on noxious harvester ants, numerous adaptative traits for avoiding predation (e.g. cranial...
Authors
Jonathan Q. Richmond, Jimmy A. McGuire, Merly Escalona, Mohan P. A. Marimuthu, Oanh Nguyen, Samuel Sacco, Eric Beraut, Erin Toffelmier, Robert N. Fisher, Ian J. Wang, H.B. Shaffer

Distribution and demography of coastal Cactus Wrens (Campylorhynchus brunneicapillus) in San Diego County, California—2022 data summary Distribution and demography of coastal Cactus Wrens (Campylorhynchus brunneicapillus) in San Diego County, California—2022 data summary

We surveyed for coastal Cactus Wren (Campylorhynchus brunneicapillus) in 507 established plots in San Diego County in 2022, encompassing 4 genetic clusters (Otay, Lake Jennings, Sweetwater/Encanto, and San Pasqual). Two surveys were completed at each plot between March 1 and July 31. Cactus Wrens were detected in 214 plots (42 percent of plots). Cactus Wrens were detected in 31 percent...
Authors
Suellen Lynn, Barbara E. Kus

Techniques for restoring damaged Mojave and western Sonoran ecosystems, including those for threatened desert tortoises and Joshua trees Techniques for restoring damaged Mojave and western Sonoran ecosystems, including those for threatened desert tortoises and Joshua trees

Ecological restoration has potential for contributing to conservation activities for threatened Mojave desert tortoises (Gopherus agassizii) and Joshua trees (Yucca brevifolia, Y. jaegeriana) and their broader ecosystems in the Mojave and western Sonoran deserts. To be effective, restoration actions deployed strategically need to halt and reverse habitat degradation, replenish or enhance...
Authors
Scott R Abella, Kristin H. Berry, Stefanie Ferrazzano

The energy–water limitation threshold explains divergent drought responses in tree growth, needle length, and stable isotope ratios The energy–water limitation threshold explains divergent drought responses in tree growth, needle length, and stable isotope ratios

Predicted increases in extreme droughts will likely cause major shifts in carbon sequestration and forest composition. Although growth declines during drought are widely documented, an increasing number of studies have reported both positive and negative responses to the same drought. These divergent growth patterns may reflect thresholds (i.e., nonlinear responses) promoted by changes...
Authors
Joan Dudney, Andrew M. Latimer, Phillip J. van Mantgem, Harold S. Zald, Claire E Willing, Jonathan Nesmith, Jennifer E Cribbs, Elizabeth R. Milano

Forest structure and residual tree growth at the Northwest Gateway project area, Lassen Volcanic National Park, California Forest structure and residual tree growth at the Northwest Gateway project area, Lassen Volcanic National Park, California

Mechanical thinning and prescribed fire are common mitigation treatments to reduce fire hazards. However, these treatments are infrequently applied together within national parks. The Northwest Gateway project at Lassen Volcanic National Park is an exception to this pattern. Various thinning prescriptions were applied to the project area in 2014, with a subset of the area prescribed...
Authors
Micah C. Wright, Phillip J. van Mantgem, Calvin Farris

Demographics and gross pathology of scoters and scaups killed by the Cosco Busan oil spill in California Demographics and gross pathology of scoters and scaups killed by the Cosco Busan oil spill in California

Unusual wildlife mortality events provide a unique opportunity to collect information on demographics, disease, and body condition in affected wildlife, which may be useful for informing oil spill damage assessments and future spill responses. In November 2007, the Cosco Busan Oil Spill occurred in San Francisco Bay, California, a globally important wintering area for waterfowl. The...
Authors
Jessie Beck, Ryan D. Carle, HannahRose M. Nevins, Susan E.W. De La Cruz, Erica Donnelly-Greenan

Bilateral palpebral reduction and concurrent mycoplasmosis in a wild Agassiz's desert tortoise (Gopherus agassizii) Bilateral palpebral reduction and concurrent mycoplasmosis in a wild Agassiz's desert tortoise (Gopherus agassizii)

A wild Agassiz's desert tortoise, Gopherus agassizii, with bilateral eyelid reduction and plaques of tissue covering the superior surface of both corneas was examined in the field and subsequently submitted to the University of Florida for diagnostics. Polymerase chain reaction (PCR), from a swab of both corneas, was positive for Mycoplasma agassizii. Two months later, the tortoise was
Authors
Elliott R. Jacobson, Kristin H. Berry, Dennis E Brooks, John F. Roberts

Distribution and abundance of Least Bell’s Vireos (Vireo bellii pusillus), Southwestern Willow Flycatchers (Empidonax traillii extimus), and Coastal California Gnatcatchers (Polioptila californica californica) at the Santa Fe Dam, Los Angeles County, Cali Distribution and abundance of Least Bell’s Vireos (Vireo bellii pusillus), Southwestern Willow Flycatchers (Empidonax traillii extimus), and Coastal California Gnatcatchers (Polioptila californica californica) at the Santa Fe Dam, Los Angeles County, Cali

In 2022, we surveyed for Least Bell’s Vireos (Vireo bellii pusillus; vireo), Southwestern Willow Flycatchers (Empidonax traillii extimus; flycatcher), and Coastal California Gnatcatchers (Polioptila californica californica; gnatcatcher) in the Santa Fe Dam detention basin and along the San Gabriel River upstream from the Santa Fe Dam near Irwindale, California. Four vireo surveys were...
Authors
Suellen Lynn, Barbara E. Kus

Protocol for the reintroduction of California red-legged frogs to Santa Monica Mountains National Recreation Area Protocol for the reintroduction of California red-legged frogs to Santa Monica Mountains National Recreation Area

Once common and widespread in Southern California, California red-legged frogs (Rana draytonii) began declining sometime in the middle of the 20th century. They were listed as threatened under the Endangered Species Act in 1996. Three small and isolated populations remained in Los Angeles and Ventura Counties by the start of the 21st century. The nearest population of California red...
Authors
Kathleen Semple Delaney, Mark Mendelsohn, Sarah M. Wenner, Adam R. Backlin, Elizabeth Gallegos, Robert N. Fisher, Seth P.D. Riley

Habitat use by breeding waterbirds in relation to tidal marsh restoration in the San Francisco Bay estuary Habitat use by breeding waterbirds in relation to tidal marsh restoration in the San Francisco Bay estuary

The South Bay Salt Pond Restoration Project aims to restore many former salt production ponds, now managed for wildlife and water quality, to tidal marsh. However, because managed ponds support large densities of breeding waterbirds, reduction of pond habitat may influence breeding waterbird distribution and abundance. We investigated habitat use associated with breeding, feeding, and...
Authors
Carley Rose Schacter, C. Alex Hartman, Mark P. Herzog, Sarah H. Peterson, Max L. Tarjan, Yewei Wang, Cheryl Strong, Rachel Tertes, Neil Warnock, Joshua T. Ackerman
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