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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5010

Climate change as a global amplifier of human–wildlife conflict Climate change as a global amplifier of human–wildlife conflict

Climate change and human–wildlife conflict are both pressing challenges for biodiversity conservation and human well-being in the Anthropocene. Climate change is a critical yet underappreciated amplifier of human–wildlife conflict, as it exacerbates resource scarcity, alters human and animal behaviours and distributions, and increases human–wildlife encounters. We synthesize evidence of...
Authors
Briana Abrahms, Neil H. Carter, T.J. Clark-Wolf, Kaitlyn M. Gaynor, Erik Johansson, Michael C Mcinturff, Anna Nisi, Kasim Rafiq, Leigh West

A big data–model integration approach for predicting epizootics and population recovery in a keystone species A big data–model integration approach for predicting epizootics and population recovery in a keystone species

Infectious diseases pose a significant threat to global health and biodiversity. Yet, predicting the spatiotemporal dynamics of wildlife epizootics remains challenging. Disease outbreaks result from complex nonlinear interactions among a large collection of variables that rarely adhere to the assumptions of parametric regression modeling. We adopted a nonparametric machine learning...
Authors
Gabriel M. Barrile, David J. Augustine, Lauren M. Porensky, Courtney J. Duchardt, Kevin T. Shoemaker, Cynthia R. Hartway, Justin D. Derner, Elizabeth Ann Hunter, Ana D. Davidson

Can angler-assisted broodstock collection programs improve harvest rates of hatchery-produced steelhead? Can angler-assisted broodstock collection programs improve harvest rates of hatchery-produced steelhead?

Fish that exhibit high foraging activity or bold behavior can be particularly vulnerable to angling. If these traits are heritable, selection through harvest can drive phenotypic change, eventually rendering a target population less vulnerable to angling and consequently impacting the quality of the fishery. In this study, we used parental-based tags to investigate whether vulnerability...
Authors
Marc A. Johnson, Michelle K. Jones, Matthew Richard Falcy, John Spangler, Ryan B. Couture, David Noakes

Invasive predator diet plasticity has implications for native fish conservation and invasive species suppression Invasive predator diet plasticity has implications for native fish conservation and invasive species suppression

Diet plasticity is a common behavior exhibited by piscivores to sustain predator biomass when preferred prey biomass is reduced. Invasive piscivore diet plasticity could complicate suppression success; thus, understanding invasive predator consumption is insightful to meeting conservation targets. Here, we determine if diet plasticity exists in an invasive apex piscivore and whether...
Authors
Hayley C. Glassic, Christopher S. Guy, Lusha M. Tronstad, Dominique R. Lujan, Michelle A. Briggs, Lindsey K. Albertson, Todd M. Koel

Low Kirtland’s Warbler fledgling survival in Wisconsin plantations relative to Michigan plantations Low Kirtland’s Warbler fledgling survival in Wisconsin plantations relative to Michigan plantations

The Kirtland’s Warbler (Setophaga kirtlandii) is a formerly endangered habitat specialist that breeds mainly in young jack pine (Pinus banksiana) forests in northern Lower Michigan, USA. The species is conservation-reliant and depends on habitat management. Management actions have primarily focused on creating jack pine plantations, but the species also breeds in red pine (Pinus resinosa...
Authors
Ashley Olah, Christine Ribic, Kim Grveles, Sarah Warner, Davin Lopez, Anna M. Pidgeon

Survival rates of band-tailed pigeons estimated using passive integrated transponder tags Survival rates of band-tailed pigeons estimated using passive integrated transponder tags

Obtaining survival estimates on the Interior population of band-tailed pigeons (Patagioenas fasciata) is challenging because they are trap shy, but the joint use of passive integrated transponder (PIT) tags and bands is a potential solution. We investigated the use of PIT tags to passively recapture band-tailed pigeon at 3 locations in New Mexico, USA, to estimate survival. From 2013...
Authors
Daniel P. Collins, Guthrie S. Zimmerman, Scott A. Carleton, William L. Kendall, Christopher L. Coxen

Activity patterns of Allegheny Woodrats (Neotoma magister) and two potential competitors in Virginia Activity patterns of Allegheny Woodrats (Neotoma magister) and two potential competitors in Virginia

Neotoma magister (Allegheny Woodrat) is a nocturnal, emergent rock-habitat specialist (i.e., inhabits rocky outcrops, boulderfields, and caves). Woodrat populations have declined range-wide due to habitat fragmentation, endoparasites, and interspecific competition. We estimated the diel activity curves of Allegheny Woodrats and assessed the effects of habitat type (exposed rock habitat...
Authors
Karen E. Powers, Emily D. Thorne, Logan R. Platt, Kayla M. Nelson Anderson, Logan M. Van Meter, Chris M. Wozniak, Richard J. Reynolds, W. Mark Ford

Parentage-based tagging using mothers balances accuracy and cost for discriminating between natural and stocked recruitment for inland fisheries Parentage-based tagging using mothers balances accuracy and cost for discriminating between natural and stocked recruitment for inland fisheries

Hatchery programmes are frequently used to supplement inland fisheries, yet achieving successful management outcomes often requires information on stocked versus naturally reproduced fish abundance. Parentage-based tagging – genetically assigning offspring to their parents – has potential to be an effective approach for distinguishing stocked and naturally reproduced fish. However...
Authors
Kimberly B. Fitzpatrick, Nina Overgaard Therkildsen, Benjamin Marcy-Quay, Harmony B. Borchardt-Wier, Suresh Sethi

Faster growth and larger size at crèche onset are associated with higher offspring survival in Adélie Penguins Faster growth and larger size at crèche onset are associated with higher offspring survival in Adélie Penguins

We conducted the first assessment of Adélie Penguin (Pygoscelis adeliae) chick survival that accounts for imperfect resighting. We found that when chicks are larger in size when they enter the crèche stage (the period when both parents forage at the same time and chicks are left relatively unprotected), they have a higher probability of survival to fledging. We investigated the...
Authors
Scott Jennings, Katie Dugger, Grant Ballard, David Ainley

Receiver mount design, transmitter depth, and wind speed affect detection probability of acoustic telemetry transmitters in a Missouri River tributary Receiver mount design, transmitter depth, and wind speed affect detection probability of acoustic telemetry transmitters in a Missouri River tributary

One of the most important considerations for acoustic telemetry study designs is detection probability between the transmitter and the receiver. Variation in environmental (i.e., wind and flow) and abiotic (i.e., bathymetry) conditions among aquatic systems can lead to differences in detection probability temporally or between systems. In this study we evaluate the effect of distance...
Authors
Tanner L. Carlson, Lindsey A. P. LaBrie, Jeff S. Wesner, Steven R. Chipps, Alison A. Coulter, Benjamin J. Schall

Gut microbiome composition associates with corticosteroid treatment, morbidity, and senescence in Chinook salmon (Oncorhynchus tshawytscha) Gut microbiome composition associates with corticosteroid treatment, morbidity, and senescence in Chinook salmon (Oncorhynchus tshawytscha)

Pacific salmon experience prolonged elevation in corticosteroid hormones during important life history events including migration, reproduction, and senescence. These periods of elevated corticosteroids correspond with changes to immunity and energy metabolism; therefore, fish may be particularly vulnerable to mortality at these times. Recent studies found that stress-induced cortisol...
Authors
Claire E. Couch, William T. Neal, Crystal L. Herron, Michael L. Kent, Carl B. Schreck, James Peterson

A review of factors affecting the susceptibility of juvenile salmonids to avian predation A review of factors affecting the susceptibility of juvenile salmonids to avian predation

We reviewed studies of piscivorous colonial waterbird predation on juvenile salmonids to synthesize current knowledge of factors affecting fish susceptibility to avian predators. Specifically, we examined peer-reviewed publications and reports from academic, governmental, and nongovernmental agencies to identify commonalities and differences in susceptibility of salmonids to avian...
Authors
Nathan J. Hostetter, Allen F. Evans, Quinn Payton, Daniel D. Roby, Donald E. Lyons, Ken Collis
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