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Publications

Publications from USGS science centers throughout the Southeast Region.

Filter Total Items: 10361

Bleaching, disease and recovery in the threatened scleractinian coral Acropora palmata in St. John, US Virgin Islands: 2003-2010 Bleaching, disease and recovery in the threatened scleractinian coral Acropora palmata in St. John, US Virgin Islands: 2003-2010

A long-term study of the scleractinian coral Acropora palmata in the US Virgin Islands (USVI) showed that diseases, particularly white pox, are limiting the recovery of this threatened species. Colonies of A. palmata in Haulover Bay, within Virgin Islands National Park, St. John, were examined monthly in situ for signs of disease and other stressors from January 2003 through December...
Authors
C.S. Rogers, E. M. Muller

Eastern mosquitofish resists invasion by nonindigenous poeciliids through agonistic behaviors Eastern mosquitofish resists invasion by nonindigenous poeciliids through agonistic behaviors

Florida is a hotspot for nonindigenous fishes with over 30 species established, although few of these are small-bodied species. One hypothesis for this pattern is that biotic resistance of native species is reducing the success of small-bodied, introduced fishes. The eastern mosquitofish Gambusia holbrooki is common in many freshwater habitats in Florida and although small-bodied (
Authors
Kevin A. Thompson, Jeffrey E. Hill, Leo G. Nico

Passive thermal refugia provided warm water for Florida manatees during the severe winter of 2009-2010 Passive thermal refugia provided warm water for Florida manatees during the severe winter of 2009-2010

Haloclines induced by freshwater inflow over tidal water have been identified as an important mechanism for maintaining warm water in passive thermal refugia (PTR) used by Florida manatees Trichechus manatus latirostris during winter in extreme southwestern Florida. Record-setting cold during winter 2009–2010 resulted in an unprecedented number of manatee deaths, adding to concerns that...
Authors
B.M. Stith, D. H. Slone, M. de Wit, H.H. Edwards, C.A. Langtimm, E.D. Swain, L.E. Soderqvist, J.P. Reid

A review of the key genetic tools to assist imperiled species conservation: analyzing West Indian manatee populations A review of the key genetic tools to assist imperiled species conservation: analyzing West Indian manatee populations

Managers faced with decisions on threatened and endangered wildlife populations often are lacking detailed information about the species of concern. Integration of genetic applications will provide management teams with a better ability to assess and monitor recovery efforts on imperiled species. The field of molecular biology continues to progress rapidly and many tools are currently...
Authors
Robert K. Bonde, Peter M. McGuire, Margaret E. Hunter

A two-phase sampling design for increasing detections of rare species in occupancy surveys A two-phase sampling design for increasing detections of rare species in occupancy surveys

1. Occupancy estimation is a commonly used tool in ecological studies owing to the ease at which data can be collected and the large spatial extent that can be covered. One major obstacle to using an occupancy-based approach is the complications associated with designing and implementing an efficient survey. These logistical challenges become magnified when working with rare species when...
Authors
Krishna Pacifici, Robert M. Dorazio, Michael J. Dorazio

A sampling design and model for estimating abundance of Nile crocodiles while accounting for heterogeneity of detectability of multiple observers A sampling design and model for estimating abundance of Nile crocodiles while accounting for heterogeneity of detectability of multiple observers

As part of the development of a management program for Nile crocodiles in Lake Nasser, Egypt, we used a dependent double-observer sampling protocol with multiple observers to compute estimates of population size. To analyze the data, we developed a hierarchical model that allowed us to assess variation in detection probabilities among observers and survey dates, as well as account for...
Authors
Matthew H. Shirley, Robert M. Dorazio, Ekramy Abassery, Amr A. Elhady, Mohammed S. Mekki, Hosni H. Asran

Effects of a drawdown on plant communities in a freshwater impoundment at Lacassine National Wildlife Refuge, Louisiana Effects of a drawdown on plant communities in a freshwater impoundment at Lacassine National Wildlife Refuge, Louisiana

Disturbance is an important natural process in the creation and maintenance of wetlands. Water depth manipulation and prescribed fire are two types of disturbance commonly used by humans to influence vegetation succession and composition in wetlands with the intention of improving wildlife habitat value. A 6,475-hectare (ha) impoundment was constructed in 1943 on Lacassine National...
Authors
Rebecca J. Howard, Larry Allain

American alligator digestion rate of blue crabs and its implications for stomach contents analysis American alligator digestion rate of blue crabs and its implications for stomach contents analysis

Stomach contents analysis (SCA) provides a snap-shot observation of a consumer's diet. Interpretation of SCA data can be complicated by many factors, including variation in gastric residence times and digestion rates among prey taxa. Although some SCA methods are reported to efficiently remove all stomach contents, the effectiveness of these techniques has rarely been tested for large...
Authors
James C. Nifong, Adam E. Rosenblatt, Nathan A. Johnson, William Barichivich, Brian Silliman, Michael R. Heithaus

Towards a theory of ecotone resilience: coastal vegetation on a salinity gradient Towards a theory of ecotone resilience: coastal vegetation on a salinity gradient

Ecotones represent locations where vegetation change is likely to occur as a result of climate and other environmental changes. Using a model of an ecotone vulnerable to such future changes, we estimated the resilience of the ecotone to disturbances. The specific ecotone is that between two different vegetation types, salinity-tolerant and salinity-intolerant, along a gradient in...
Authors
Jiang Jiang, Daozhou Gao, Donald L. DeAngelis

Annual fluxes of sediment-associated trace/major elements, carbon, nutrients, and sulfur from US coastal rivers Annual fluxes of sediment-associated trace/major elements, carbon, nutrients, and sulfur from US coastal rivers

About 260–270 Mt of suspended sediment are discharged annually from the conterminous USA; approximately 69% derives from Gulf rivers (n = 36), 24% from Pacific rivers (n = 42), and 7% from Atlantic rivers (n = 54). Elevated sediment-associated chemical concentrations relative to baseline levels occur in the reverse order of sediment discharges: Atlantic rivers (49%) > Pacific rivers (40%...
Authors
Arthur J. Horowitz, Verlon C. Stephens, Kent A. Elrick, James J. Smith

Toxicity of carbon nanotubes to freshwater aquatic invertebrates Toxicity of carbon nanotubes to freshwater aquatic invertebrates

Carbon nanotubes (CNTs) are hydrophobic in nature and thus tend to accumulate in sediments if released into aquatic environments. As part of our overall effort to examine the toxicity of carbon-based nanomaterials to sediment-dwelling invertebrates, we have evaluated the toxicity of different types of CNTs in 14-d water-only exposures to an amphipod (Hyalella azteca), a midge (Chironomus...
Authors
Joseph N. Mwangi, Ning Wang, Christopher G. Ingersoll, Doug K. Hardesty, Eric L. Brunson, Hao Li, Baolin Deng

Quantification of water-level variability effect on plant species populations using paleoecological and hydrological time series data Quantification of water-level variability effect on plant species populations using paleoecological and hydrological time series data

Soil cores provide valuable data on historical changes in vegetation and hydrologic conditions. Empirical models were developed to quantify the effect of meteorological and hydrologic forcing on plant species distributions over a 110-year period in Water Conservation Area 1 (WCA1) in the Florida Everglades, also known as the Arthur R. Marshall Loxahatchee National Wildlife Refuge...
Authors
Edwin A. Roehl, Paul Conrads, Christopher Bernhardt
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