Software
An official USGS software project is code reviewed and approved at the bureau-level for distribution.
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R code for calculating imperilment of freshwater fish with a Bayesian belief network R code for calculating imperilment of freshwater fish with a Bayesian belief network
This R script is reproduces a Bayesian belief network built within the propriety software program, Netica. The R- and Netica-based belief networks were used in Dunn and Schumann et al. (in press), which presents an approach for calculating imperilment of freshwater fishes.
algaeClassify algaeClassify
The goal of algaeClassify is to facilitate the analysis of taxonomic and functional trait data for phytoplankton.
Population Viability Model for Spot-tailed earless lizard Population Viability Model for Spot-tailed earless lizard
Code for simulating Spot-tailed earless lizard populations under habitat loss and road mortality threats in central Texas
Predicting fish responses to climate change using a joint species, spatially dependent physiologically guided abundance model Predicting fish responses to climate change using a joint species, spatially dependent physiologically guided abundance model
Predicting the effects of warming temperatures on the abundance and distribution of organisms under future climate scenarios often requires extrapolating species-environment correlations to thermal conditions not currently experienced by a species or to temperatures that exceed the range of observed data. For poikilotherms, incorporating species’ thermal physiology to inform...
Population genetic structure of white-tailed deer using microsatellites i the Mid-Atalntic region Population genetic structure of white-tailed deer using microsatellites i the Mid-Atalntic region
Results of 11 microsatellites for white-tailed deer collected in Maryland, New York, Ohio, Pennsylvania, and Virginia from 2014 to 2022 for genetic analysis. In this project we assessed genetic structure using different analyses, and evaluated the performance of assignment tests to correctly match deer to origin (defined as genetic cluster, state or physiographic province). This...
CalPUR-LUE CalPUR-LUE
Estimating High Resolution Multi-Cropped Irrigated Land Use Using a Pesticide Use Reporting Database in California Estimating the amount of water needed for agriculture is vital for food and water security. These estimates rely on maps of crop type and acreage that have limited ground-truthing or represent multiple years or regional cropping patterns. In regions where crops change...