Software

DReAMER DReAMER: Depth Retrieval Algorithms for Mapping and Exploration of Rivers Description The software application made available through this repository is designed for mapping water depth in river channels from passive optical remotely sensed data. The program provides convenient access to a number of different methods for deriving bathymetric information from images and...

We provide the following R Markdown and NetLogo files corresponding to our application of agent-based models to assess management responses to chronic wasting disease among white-tailed deer in Pennsylvania, USA.

This software release contains 4 files with R scripts organized according to the objective (e.g., format the data, model fitting, etc.). The overall objective of the project was to: analyzed ten years of capture-mark-recapture data spanning 2000 − 2014 for a population of Espadarana prosoblepon in El Copé, Panama, encompassing a period before and after a Batrachochytrium dendrobatidis...

This code release provides the workflow and analysis for our propose approach to (i) learn the effect of environmental covariates on detection probabilities from CR data and (ii) transfer these detection functions to CPUE models for improved inference.

This release introduces the pwfdf-api package. The package provides Python and command-line interfaces to search, query, and download hazard assessments from the PWFDF collection. This initial release introduces the four main commands: assessments: List PWFDF assessments that match search criteria browse: Open PWFDF search results in a web browser download: Download PWFDF assessments to...

Github repository that contains python code workflows for generating 3-dimensional images of topography, hydrography, and other remote sensing data with Blender, an open-source visualization software.