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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5011

Direct and indirect pathways for environmental drivers of hatching success in the loggerhead sea turtle Direct and indirect pathways for environmental drivers of hatching success in the loggerhead sea turtle

Nest site selection has consequences for hatching success by mediating the temperature and moisture conditions that eggs experience during the incubation period. Understanding the potentially complex pathways by which nest placement influences these abiotic mediators, and therefore hatching success, is important for predicting which nests will be successful and which may require...
Authors
Mattie J. Whitesell, Elizabeth Ann Hunter, David C. Rostal, John M. Carroll

Natural resource system size can be used for managing recreational use Natural resource system size can be used for managing recreational use

Outdoor recreation provides societal benefits that are often measured by the amount of use natural resource systems receive. Still, the amount of resource use natural resource systems receive is often unknown or unstudied. Monitoring and quantifying resource use is often logistically difficult and costly but is paramount to optimize societal benefits. Identifying a simple and readily...
Authors
Derek S. Kane, Kevin L. Pope, Keith D. Koupal, Mark A. Pegg, Christopher J. Chizinski, Mark A. Kaemingk

Comparative assessment of laboratory-derived thermal maxima of Gila trout (oncorhynchus Gilae) with current stream temperatures Comparative assessment of laboratory-derived thermal maxima of Gila trout (oncorhynchus Gilae) with current stream temperatures

Gila trout (Oncorhynchus gilae) represent an iconic species of the American Southwest. The salmonid has survived extensive logging, livestock grazing, and mining, and is currently threatened by climate change, wildfire, and extended drought. Long-term conservation and recovery of the species and its unique lineages rely on stocking and translocation into historically inhabited streams...
Authors
Tyler J. Wallin, Colleen A. Caldwell

Accounting for spatial heterogeneity in visual obstruction in line-transect distance sampling of gopher tortoises Accounting for spatial heterogeneity in visual obstruction in line-transect distance sampling of gopher tortoises

Line-transect distance sampling (LTDS) surveys are commonly used to estimate abundance of animals or objects. In terrestrial LTDS surveys of gopher tortoise (Gopherus polyphemus) burrows, the presence of ground-level vegetation substantially decreases detection of burrows of all sizes, but no field or analytical methods exist to control for spatially heterogeneous vegetation obstruction...
Authors
Heather E. Gaya, Lora L. Smith, Clinton T. Moore

Minimal diel vertical migration and consistent zooplankton capturability in low productivity reservoirs, Oregon Minimal diel vertical migration and consistent zooplankton capturability in low productivity reservoirs, Oregon

Diel migrations of zooplanktons occur in marine and freshwater systems and can complicate inferences from studies. If populations perform vertical or horizontal diel migrations, daytime-only sampling can mischaracterize distributions and abundances. Zooplanktons also often display reduced capture avoidance at night and occupy areas easier to sample near the surface and away from littoral...
Authors
Christina Amy Murphy, Amanda M.M. Pollock, Angela Strecker, Sherri L. Johnson

Rotenone induces mortality of invasive Lake Trout and Rainbow Trout embryos Rotenone induces mortality of invasive Lake Trout and Rainbow Trout embryos

Objective Nonnative fish, including Lake Trout Salvelinus namaycush and Rainbow Trout Oncorhynchus mykiss, are actively invading lakes and streams and threatening Cutthroat Trout O. clarkii and other native species in the western United States. Programs have been implemented to suppress invasive trout using netting, trapping, electrofishing, angling, or other traditional capture methods...
Authors
Alex S. Poole, Todd M. Koel, Alexander V. Zale, Molly A. H. Webb

Species and physiographic factors drive Indian cucumber root and Canada mayflower plant chemistry: Implications for white-tailed deer forage quality Species and physiographic factors drive Indian cucumber root and Canada mayflower plant chemistry: Implications for white-tailed deer forage quality

Nutrition is fundamental to white-tailed deer (Odocoileus virginianus) management given its relationship to habitat carrying capacity and population productivity. Ecological Sites (ESs) are a United States federal landscape management unit of specific land potential due to unique soils, topography, climate, parent material, and perhaps deer forage nutritional value. We present results of...
Authors
Nico Navarro, Duane R. Diefenbach, Marc E. McDill, Emily Just Domoto, Christopher S. Rosenberry, Patrick J. Drohan

Adult white-tailed deer survival in hunted populations on public and private lands Adult white-tailed deer survival in hunted populations on public and private lands

Estimates of sex- and age-specific survival are important for guiding population management decisions for white-tailed deer (Odocoileus virginianus). However, differences in deer survival between public and private lands can exist and, if unaccounted for, may affect wildlife agencies' ability to effectively manage statewide and local deer populations. From 2014 to 2016, we radiocollared...
Authors
Kevyn H. Wiskirchen, T.C. Jacobsen, S.S. Ditchkoff, S. Demarais, J. Barry Grand

A practical guide to understanding and validating complex models using data simulations A practical guide to understanding and validating complex models using data simulations

Biologists routinely fit novel and complex statistical models to push the limits of our understanding. Examples include, but are not limited to, flexible Bayesian approaches (e.g. BUGS, stan), frequentist and likelihood-based approaches (e.g. packages lme4) and machine learning methods.These software and programs afford the user greater control and flexibility in tailoring complex...
Authors
Graziella Vittoria DiRenzo, Ephraim Hanks, David A. W. Miller

Investigating impacts of small dams and dam removal on dissolved oxygen in streams Investigating impacts of small dams and dam removal on dissolved oxygen in streams

Small surface-release dams are prevalent across North American watersheds and can alter stream flow, thermal regimes, nutrient dynamics, and sediment transport. These dams are often implicated as a cause of negative water quality impacts—including reduced dissolved oxygen (DO)—and dam removal is increasingly employed to restore natural stream processes and improve DO. However, published...
Authors
Katherine M. Abbott, Peter A. Zaidel, Allison H. Roy, Kristopher M. Houle, Keith H. Nislow

Lithology and disturbance drive cavefish and cave crayfish occurrence in the Ozark Highlands ecoregion Lithology and disturbance drive cavefish and cave crayfish occurrence in the Ozark Highlands ecoregion

Diverse communities of groundwater-dwelling organisms (i.e., stygobionts) are important for human wellbeing; however, we lack an understanding of the factors driving their distributions, making it difficult to protect many at-risk species. Therefore, our study objective was to determine the landscape factors related to the occurrence of cavefishes and cave crayfishes in the Ozark...
Authors
Joshua B. Mouser, Shannon K. Brewer, Matthew L. Niemiller, Robert Mollenhauer, Ronald A. Van Den Bussche

High-density genomic data reveal fine-scale population structure and pronounced islands of adaptive divergence in lake whitefish (Coregonus clupeaformis) from Lake Michigan High-density genomic data reveal fine-scale population structure and pronounced islands of adaptive divergence in lake whitefish (Coregonus clupeaformis) from Lake Michigan

Understanding patterns of genetic structure and adaptive variation in natural populations is crucial for informing conservation and management. Past genetic research using 11 microsatellite loci identified six genetic stocks of lake whitefish (Coregonus clupeaformis) within Lake Michigan, USA. However, ambiguity in genetic stock assignments suggested those neutral microsatellite markers...
Authors
Yue Shi, Jared Joseph Homola, Peter T. Euclide, Daniel A. Isermann, David C. Caroffino, Megan V. McPhee
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