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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5350

Factors influencing spatial and temporal patterns of Lanius ludovicianus (Loggerhead Shrike) occupancy at a grassland-sagebrush ecotone Factors influencing spatial and temporal patterns of Lanius ludovicianus (Loggerhead Shrike) occupancy at a grassland-sagebrush ecotone

Lanius ludovicianus (Loggerhead Shrike) is a predatory songbird that has experienced a severe population decline throughout its range since the 1940s, likely driven by a combination of factors, including habitat loss and fragmentation. Occupying larger territories compared to many other passerines, L. ludovicianus requires open habitat with interspersed trees and shrubs for nesting and...
Authors
Holly M. Todaro, Scott R. Loss, Robert Charles Lonsinger, Courtney J. Duchardt

Predicting aquatic habitat connectivity across watershed boundaries: Implications for interbasin spread of nonindigenous aquatic species. Predicting aquatic habitat connectivity across watershed boundaries: Implications for interbasin spread of nonindigenous aquatic species.

Understanding habitat connectivity is critical for managing nonindigenous aquatic species (NAS) spread. Dams and watershed boundaries can be impassable to NAS during typical conditions but may become temporarily passable during flooding. The goal of our project was to develop an approach for identifying locations of aquatic connectivity at a fine spatial scale along watershed boundaries...
Authors
Peter J. Pfaff, Alison A. Coulter, Benjamin J. Schall, Tanner Davis, Steven R. Chipps, David P. Coulter

Context matters: Intrinsic and extrinsic factors modulate habitat choices in an endangered forest bat Context matters: Intrinsic and extrinsic factors modulate habitat choices in an endangered forest bat

Effective management of declining species depends upon fundamental understanding of habitat preferences during key life stages such as reproduction. Peripheral populations of wildlife are often poorly understood and rarely the focus of study, despite their contribution to genetic diversity and their potential to aid in recolonization if a species becomes endangered. We assessed the...
Authors
Ellen Whittle, Ian Abernethy, Anna D. Chalfoun

Catchment prioritization for freshwater mussel conservation in the Northeastern United States based on distribution modelling Catchment prioritization for freshwater mussel conservation in the Northeastern United States based on distribution modelling

Freshwater mussels are critical to the health of freshwater systems, but their populations are declining dramatically throughout the world. The limited resources available for freshwater mussel conservation necessitates the geographic prioritization of conservation-related actions. However, lack of knowledge about freshwater mussel spatial distributions hinders decision making in this...
Authors
Rebecca S.M. O’Brien, Graziella Vittoria DiRenzo, Allison H. Roy, Jason Carmignani, Rebecca M. Quinones, Jennifer B. Rogers, Beth I. Swartz

Non-lethal detection of Renibacterium salmoninarum in Greenback Cutthroat Trout Oncorhynchus clarkii stomias comparing mucus, blood, and ovarian fluid samples to kidney tissues Non-lethal detection of Renibacterium salmoninarum in Greenback Cutthroat Trout Oncorhynchus clarkii stomias comparing mucus, blood, and ovarian fluid samples to kidney tissues

Objective Renibacterium salmoninarum, the causative agent of bacterial kidney disease, poses a major threat to both wild and aquaculture salmonid populations. Traditional detection methods typically involve lethal sampling to collect kidney tissues but are often impractical for species of conservation concern. This study evaluates nonlethal sampling techniques for detecting R...
Authors
Firestone B.R. Tawni, Eric R. Fetherman, Dana L. Winkelman

Seasonal synchronicity and multi-decadal stability of headwater biogeochemistry in the northern temperate zone Seasonal synchronicity and multi-decadal stability of headwater biogeochemistry in the northern temperate zone

Temporal patterns in chemistry of headwater streams reflect responses of water and elemental cycles to perturbations occurring at local to global scales. We evaluated multi-scale temporal patterns in up to 32 y of monthly observations of stream chemistry (ammonium, calcium, dissolved organic carbon, nitrate, total dissolved phosphorus, and sulfate) in 22 reference catchments within the...
Authors
Tamara K. Harms, Jim Hood, Mark David Scheuerell, Irena F. Creed, John L. Campbell, I. J. Fernandez, S. N. Higgins, Sherri L. Johnson, James B. Shanley, Stephen Sebestyen, K. L. Webster, H. Yoa

Simple bagged movement models for telemetry data Simple bagged movement models for telemetry data

Determining which statistical methods are appropriate for data is both user and data dependent and prone to change as new methodology becomes available. This process encompasses model ideation, model selection, and determining appropriate use of statistical methods. Literature on models for animal movement emerging in the past two decades has yielded a rich collection of statistical...
Authors
Andrew B. Whetten, Trevor J. Hefley, David A. Haukos, Dustin E. Brewer

Chinook salmon Oncorhynchus tshawytscha (Walbaum, 1792) life history influences how diagnostic cranial structures relate to fish length Chinook salmon Oncorhynchus tshawytscha (Walbaum, 1792) life history influences how diagnostic cranial structures relate to fish length

Diagnostic bones can aid in identification and size determination of fishes from ingested prey, archaeological remains or damaged specimens. We extracted diagnostic structures, including cleithra, dentaries, opercles and otoliths, from juvenile spring Chinook salmon (Oncorhynchus tshawytscha) from three distinct groups: hatchery, naturally produced and surrogate, representing shared...
Authors
Jeremy D. Romer, Kevin A. Stertz, Keiara Pham, Christina Amy Murphy

Invasive predatory fish occupies highest trophic position leading to expansion of isotopic niches in a riverine food web Invasive predatory fish occupies highest trophic position leading to expansion of isotopic niches in a riverine food web

Invasive species are drivers of ecological change with the potential to reshape the structure and function of terrestrial and aquatic ecosystems. The invasive flathead catfish (Pylodictis olivaris) is an opportunistic predator that has established a rapidly growing population in the Susquehanna River, Pennsylvania, USA, since they were first detected in 2002. Although the predatory...
Authors
Olivia C. Hodgson, Sydney Stark, Megan K. Schall, Geoffrey D. Smith, Kelly L. Smalling, Tyler Wagner

Disturbance is the primary determinant of food chain length when the top predator is constant Disturbance is the primary determinant of food chain length when the top predator is constant

Food chain length (FCL) is a primary determinant of food web structure and is hypothesized to be influenced by habitat size, productivity, and disturbance. Understanding the environmental characteristics that determine food chain length can assist in understanding how food webs may be impacted due to changes in habitats and environmental characteristics. This study examines the impact of
Authors
Sarah F. Sorensen, Daniel D. Magoulick

Long‐term regime shifts in xeric ecoregion freshwater fish assemblages due to Anthropogenic and climate stressors Long‐term regime shifts in xeric ecoregion freshwater fish assemblages due to Anthropogenic and climate stressors

Shifting climate regimes are projected to increase the area of xeric regions and result in more pronounced intermittency across river networks. Given these projected changes, we aim to understand the factors contributing to species persistence under increasing aridity. To investigate how changing flow regimes are related to changes in fish richness and assemblage composition, we compiled...
Authors
Corey A. Krabbenhoft, Jane S. Rogosch, Freya Elizabeth Rowland

3D habitat complexity and coral morphology modulate reef fish functional structure in a marine national park 3D habitat complexity and coral morphology modulate reef fish functional structure in a marine national park

The ongoing degradation of coral reef habitats is widely acknowledged to have adverse effects on the abundance and diversity of reef fish populations, yet the direct effects on ecosystem functions remain uncertain. This study used a quantitative approach to determine the mechanistic links between fish assemblages and ecological function. We investigated the effects of 3D habitat...
Authors
Sofia B. Ferreira, John H.R. Burns, Atsuko Fukunaga, Lillian Joy Tuttle Raz, Sheila A. McKenna, Kailea Annandale, Ryan J. Monello
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