To contribute to an investigation on possible endocrine impacts in three sites along the lower Colorado River in Arizona, especially in male fishes, this study addressed the null hypothesis that aquatic species in southern sites did not exhibit evidence of endocrine disruption as compared with those in nonimpacted sites. The results presented are intended to provide managers with science-based information and interpretations about the reproductive condition of biota in their habitat along the lower Colorado River to minimize any potential adverse effects to trust fish and wildlife resources and to identify water resources of acceptable quality. In particular, these data can inform decision making about wastewater discharges into the Colorado River that directly supplies water to Arizona refuges located along the river. These data are integral to the USFWS proposal entitled 'AZ - Endocrine Disruption in Razorback Sucker and Common Carp on National Wildlife Refuges along the Lower Colorado River' that was proposed to assess evidence of endocrine disruption in carp and razorback suckers downstream of Hoover Dam.