Publications
Publications from USGS science centers throughout the Southeast Region.
Filter Total Items: 10384
Ecological prediction with nonlinear multivariate time-frequency functional data models Ecological prediction with nonlinear multivariate time-frequency functional data models
Time-frequency analysis has become a fundamental component of many scientific inquiries. Due to improvements in technology, the amount of high-frequency signals that are collected for ecological and other scientific processes is increasing at a dramatic rate. In order to facilitate the use of these data in ecological prediction, we introduce a class of nonlinear multivariate time...
Authors
Wen-Hsi Yang, Christopher K. Wikle, Scott H. Holan, Mark L. Wildhaber
Custom microarray construction and analysis for determining potential biomarkers of subchronic androgen exposure in the Eastern Mosquitofish (Gambusia holbrooki) Custom microarray construction and analysis for determining potential biomarkers of subchronic androgen exposure in the Eastern Mosquitofish (Gambusia holbrooki)
Background The eastern mosquitofish (Gambusia holbrooki) has the potential to become a bioindicator organism of endocrine disrupting chemicals (EDCs) due to its androgen-driven secondary sexual characteristics. However, the lack of molecular information on G. holbrooki hinders its use as a bioindicator coupled with biomarker data. While traditional gene-by-gene approaches provide insight...
Authors
Erica K. Brockmeier, Fahong Yu, David Moraga Amador, Timothy A. Bargar, Nancy D. Denslow
Variation in salinity tolerance among larval anurans: implications for community composition and the spread of an invasive, non-native species Variation in salinity tolerance among larval anurans: implications for community composition and the spread of an invasive, non-native species
Amphibians in freshwater coastal wetlands periodically experience acute exposure to salinity from hurricane-related overwash events, as well as chronic exposure associated with rising sea levels. In a comparative experimental approach, we examined whether seven species of anuran amphibians vary in their tolerance to changes in salinity. In a laboratory study, we exposed larval Hyla...
Authors
Mary E. Brown, Susan C. Walls
Croaking gourami, Trichopsis vittata (Cuvier, 1831), in Florida, USA Croaking gourami, Trichopsis vittata (Cuvier, 1831), in Florida, USA
The croaking gourami, Trichopsis vittata, is documented from wetland habitats in southern Florida. This species was previously recorded from the same area over 15 years ago, but was considered extirpated. The rediscovery of a reproducing population of this species highlights the dearth of information available regarding the dozens of non-native fishes in Florida, as well as the need for...
Authors
Pamela J. Schofield, Darren J. Pecora
The importance of record length in estimating the magnitude of climatic changes: an example using 175 years of lake ice-out dates in New England The importance of record length in estimating the magnitude of climatic changes: an example using 175 years of lake ice-out dates in New England
Many studies have shown that lake ice-out (break-up) dates in the Northern Hemisphere are useful indicators of late winter/early spring climate change. Trends in lake ice-out dates in New England, USA, were analyzed for 25, 50, 75, 100, 125, 150, and 175 year periods ending in 2008. More than 100 years of ice-out data were available for 19 of the 28 lakes in this study. The magnitude of...
Authors
Glenn A. Hodgkins
Ultimate pier and contraction scour prediction in cohesive soils at selected bridges in Illinois Ultimate pier and contraction scour prediction in cohesive soils at selected bridges in Illinois
The Scour Rate In COhesive Soils-Erosion Function Apparatus (SRICOS-EFA) method includes an ultimate scour prediction that is the equilibrium maximum pier and contraction scour of cohesive soils over time. The purpose of this report is to present the results of testing the ultimate pier and contraction scour methods for cohesive soils on 30 bridge sites in Illinois. Comparison of the...
Authors
Timothy D. Straub, Thomas M. Over, Marian M. Domanski
Implications of multi-scale sea level and climate variability for coastal resources Implications of multi-scale sea level and climate variability for coastal resources
While secular changes in regional sea levels and their implications for coastal zone management have been studied extensively, less attention is being paid to natural fluctuations in sea levels, whose interaction with a higher mean level could have significant impacts on low-lying areas, such as wetlands. Here, the long record of sea level at Key West, FL is studied in terms of both the...
Authors
Christina Karamperidou, Victor Engel, Upmanu Lall, Erik Stabenau, Thomas J. Smith
Role of a polymorphism in a Hox/Pax-responsive enhancer in the evolution of the vertebrate spine Role of a polymorphism in a Hox/Pax-responsive enhancer in the evolution of the vertebrate spine
Patterning of the vertebrate skeleton requires the coordinated activity of Hox genes. In particular, Hox10 proteins are essential to set the transition from thoracic to lumbar vertebrae because of their rib-repressing activity. In snakes, however, the thoracic region extends well into Hox10-expressing areas of the embryo, suggesting that these proteins are unable to block rib formation...
Authors
Isabel Guerreiro, Andreia Nunes, Joost M. Woltering, Ana Casaca, Ana Novoa, Tania Vinagre, Margaret E. Hunter, Denis Duboule, Moises Mallo
Estimating abundance while accounting for rarity, correlated behavior, and other sources of variation in counts Estimating abundance while accounting for rarity, correlated behavior, and other sources of variation in counts
The class of N-mixture models allows abundance to be estimated from repeated, point count surveys while adjusting for imperfect detection of individuals. We developed an extension of N-mixture models to account for two commonly observed phenomena in point count surveys: rarity and lack of independence induced by unmeasurable sources of variation in the detectability of individuals...
Authors
Robert M. Dorazio, Juulien Martin, Holly H. Edwards
Histopathological analysis of fish from Acorn Fork Creek, Kentucky exposed to hydraulic fracturing fluid releases Histopathological analysis of fish from Acorn Fork Creek, Kentucky exposed to hydraulic fracturing fluid releases
Fracking fluids were released into Acorn Fork, KY, a designated Outstanding State Resource Water, and habitat for the threatened Chrosomus cumberlandensis (Blackside Dace). As a result, stream pH dropped to 5.6 and stream conductivity increased to 35,000 μS/cm, and aquatic invertebrates and fish were killed or distressed. The objective of this study was to describe post-fracking water...
Authors
Diana M. Papoulias, Anthony L. Velasco
Water levels and water quality in the Sparta-Memphis aquifer (middle Claiborne aquifer) in Arkansas, spring-summer 2009 Water levels and water quality in the Sparta-Memphis aquifer (middle Claiborne aquifer) in Arkansas, spring-summer 2009
The U.S. Geological Survey in cooperation with the Arkansas Natural Resources Commission and the Arkansas Geological Survey has monitored water levels in the Sparta Sand of Claiborne Group and Memphis Sand of Claiborne Group (herein referred to as the Sparta Sand and the Memphis Sand, respectively) since the 1920s. Groundwater withdrawals have increased while water levels have declined...
Authors
T.P. Schrader
Analysis and inundation mapping of the April-May 2011 flood at selected locations in northern and eastern Arkansas and southern Missouri Analysis and inundation mapping of the April-May 2011 flood at selected locations in northern and eastern Arkansas and southern Missouri
Precipitation that fell from April 19 through May 3, 2011, resulted in widespread flooding across northern and eastern Arkansas and southern Missouri. The first storm produced a total of approximately 16 inches of precipitation over an 8-day period, and the following storms produced as much as 12 inches of precipitation over a 2-day period. Moderate to major flooding occurred quickly...
Authors
Drew A. Westerman, Katherine R. Merriman, Jeanne L. De Lanois, Charles Berenbrock