Publications
Publications from USGS science centers throughout the Southeast Region.
Filter Total Items: 10352
A guide to environmental DNA extractions for non-molecular trained biologists, ecologists, and conservation scientists A guide to environmental DNA extractions for non-molecular trained biologists, ecologists, and conservation scientists
Ecologists, biologists, and conservation scientists are increasingly interested in the use of environmental DNA (eDNA) data for research and potentially decision-making. While commercial DNA extraction kits are typically user-friendly and accessible, they may fail to deliver the desired results with inherently complex eDNA samples, necessitating protocol optimization or educated...
Authors
Jessica Marie Rieder, Eliane Jemmi, Margaret Hunter, Irene Adrian-Kalchhauser
Modeling the effects of temperature and limiting nutrients on the competition of an invasive floating plant, Pontederia crassipes, with submersed vegetation in a shallow lake Modeling the effects of temperature and limiting nutrients on the competition of an invasive floating plant, Pontederia crassipes, with submersed vegetation in a shallow lake
The potential for a non-native plant species to invade a new habitat depends on broadscale factors such as climate, local factors such as nutrient availability, and the biotic community of the habitat into which the plant species is introduced. We developed a spatially explicit model to assess the risk of expansion of a floating invasive aquatic plant species (FAV), the water hyacinth...
Authors
Linhao Xu, Don DeAngelis
Immunotoxic response of bio-based plastic on early life stage zebrafish (Danio rerio): A safe alternative to petroleum-based plastics? Immunotoxic response of bio-based plastic on early life stage zebrafish (Danio rerio): A safe alternative to petroleum-based plastics?
Bio-based plastics are marketed as environmentally friendly alternatives to petroleum-based plastics, although they require specific composting conditions for degradation, which leads to their accumulation in the environment and potential risks to aquatic organisms. We hypothesized that the accumulation of bio-based plastics may induce immunotoxic responses in fish. Our research focused...
Authors
Haodong Cheng, Yao Zou, Bin Lu, Jiazhen Wang, Rongrong Xuan, Jason Tyler Magnuson, Chunmiao Zheng, Wenhui Qiu
Survey effort and targeted landbird community metrics at Indiana lowland forest restoration sites Survey effort and targeted landbird community metrics at Indiana lowland forest restoration sites
Many sampling and analytical methods can estimate the abundance, distributions, and diversity of birds and other wildlife. However, challenges with sample size and analytical capacity can make these methods difficult to implement for resource-limited monitoring programs. To apprise efficient and attainable sampling designs for landbird monitoring programs with limited observational data...
Authors
Benjamin M West, Mark L. Wildhaber, Nicholas S. Green, John P. Isanhart, M. Victoria McDonald, Michael J. Hooper
Large eddy simulation of cross-shore hydrodynamics under random waves in the inner surf and swash zones Large eddy simulation of cross-shore hydrodynamics under random waves in the inner surf and swash zones
A 3D large eddy simulation coupled with a free surface tracking scheme was used to simulate cross-shore hydrodynamics as observed in a large wave flume experiment. The primary objective was to enhance the understanding of wave-backwash interactions and the implications for observed morphodynamics. Two simulation cases were carried out to elucidate key processes of wave-backwash...
Authors
Benjamin Tsai, Tian-Jian Hsu, Seok-Bong Lee, Maria Pontiki, Jack A. Puleo, Meagan E. Wengrove
Ambient flow and transport in long-screened, sand-packed wells: Insights into cross contamination and wellbore flow Ambient flow and transport in long-screened, sand-packed wells: Insights into cross contamination and wellbore flow
The presence of long-screened wells with a surrounding sand pack can have a major effect on the redistribution of contaminants in groundwater, particularly when the wells are set in low-hydraulic conductivity aquifers. Such redistribution, or cross contamination, can occur through vertical flow and advective transport or by in-well mixing via multiple non-advective transport processes. A...
Authors
Philip Harte, Christopher Palumbo Ely, Nicholas F. Teague, Nicole C. Fenton, Anthony A. Brown
An integrative paradigm for building causal knowledge An integrative paradigm for building causal knowledge
A core aspiration of the ecological sciences is to determine how systems work, which implies the challenge of developing a causal understanding. Causal inference has long been approached from a statistical perspective, which can be limited and restrictive for a variety of reasons. Ecologists and other natural scientists have historically pursued mechanistic knowledge as an alternative...
Authors
James Grace
Per- and polyfluoroalkyl substances (PFAS) in drinking water in Southeast Los Angeles: Industrial legacy and environmental justice Per- and polyfluoroalkyl substances (PFAS) in drinking water in Southeast Los Angeles: Industrial legacy and environmental justice
Per- and polyfluoroalkyl substances (PFAS) are persistent chemicals of increasing concern to human health. PFAS contamination in water systems has been linked to a variety of sources including hydrocarbon fire suppression activities, industrial and military land uses, agricultural applications of biosolids, and consumer products. To assess PFAS in California tap water, we collected 60...
Authors
Julie Von Behren, Peggy Reynolds, Paul M. Bradley, James L. Gray, Dana W. Kolpin, Kristin M. Romanok, Kelly Smalling, Catherine Carpenter, Wendy Avila, Paul B. English, Rena R. Jones, Gina Solomon
Projected sea-level rise and high tide flooding at Dry Tortugas National Park, Florida Projected sea-level rise and high tide flooding at Dry Tortugas National Park, Florida
Introduction National parks and preserves in the South Atlantic-Gulf Region contain valuable coastal habitats such as tidal wetlands and mangrove forests, as well as irreplaceable historic buildings and archeological sites located in low-lying areas. These natural and cultural resources are vulnerable to accelerated sea-level rise and escalating high tide flooding events. Through a...
Authors
Hana R. Thurman, Nicholas M. Enwright, Michael J. Osland, Davina L. Passeri, Richard H. Day, Bethanie M. Simons
A novel tool to selectively deliver a control agent to filter-feeding silver and bighead carp A novel tool to selectively deliver a control agent to filter-feeding silver and bighead carp
Invasive carp pose substantial economic and ecological damage when populations are widespread in freshwater systems within the United States. Resource managers in the United States have few chemical control tools to selectively remove nuisance fish. This study examined whether Antimycin–A (antimycin) wax encapsulated microparticles could cause selective lethality in invasive carps. The...
Authors
Blake W. Sauey, Gavin N. Saari, Joel G. Putnam, Justine E. Nelson, James J. Wamboldt, J. Nolan Steiner, Robin D. Calfee
Chloride concentrations in groundwater from the western part of the Southern Hills regional aquifer system, Louisiana, 2021–22 Chloride concentrations in groundwater from the western part of the Southern Hills regional aquifer system, Louisiana, 2021–22
Groundwater is heavily used for public supply and industrial uses in the Baton Rouge, Louisiana, area. Lowered water levels resulting from groundwater withdrawals have induced the movement of saltwater towards wells in East Baton Rouge and West Baton Rouge Parishes. Saltwater intrusion has the potential to affect water supply infrastructure, reduce water availability for some uses, and...
Authors
M.A. Lindaman
Water-quality monitoring strategy for Mount Hope Bay and the Taunton River Estuary, southeastern Massachusetts Water-quality monitoring strategy for Mount Hope Bay and the Taunton River Estuary, southeastern Massachusetts
The U.S. Geological Survey, in cooperation with the Massachusetts Department of Environmental Protection (MassDEP), began a study in 2018 to develop a water-quality monitoring strategy (WQMS) for Mount Hope Bay and the Taunton River Estuary in southeastern Massachusetts. MassDEP is interested in water-quality data in Mount Hope Bay and the Taunton River Estuary to characterize current...
Authors
David S. Armstrong