Andy Ramey, Ph.D.
Andy Ramey is the Director of the Molecular Ecology Lab at the USGS Alaska Science Center. He leads a team of scientists that develop and apply genomic tools to advance research pertaining to wildlife health and disease, population genetics, and environmental DNA. Research in the Molecular Ecology Lab promotes informed decisions regarding the conservation of fish and wildlife resources.
Andy Ramey currently serves as the Director of the Molecular Ecology Lab at the USGS Alaska Science Center. Scientists working in the Molecular Ecology Lab develop and apply tools to obtain information on the health, distribution, and genomic characteristics of biological natural resources. This includes collecting and interpreting data on the health and disease status of fish and wildlife, the genomics of animal and plant populations, and the distribution of animals and pathogens using environmental DNA. Information is used by partners and the public to make informed decisions regarding the conservation of fish and wildlife resources.
Professional Experience
2012–Present Research Wildlife Geneticist, USGS Alaska Science Center, Alaska
2006–2012 Geneticist, USGS Alaska Science Center, Alaska
2003–2006 Wildlife Biologist, USGS Alaska Science Center, Alaska
2001–2002 Biological Science Technician, Togiak National Wildlife Refuge, Alaska
Education and Certifications
Ph.D. 2015 University of Georgia, Athens, GA Veterinary and Biomedical Sciences
B.S. 2001 Colorado State University, Fort Collins, CO Fishery Biology and Wildlife Biology
Affiliations and Memberships*
Associate Editor: Journal of Wildlife Diseases (2016–present)
Associate Editor: Ornithology (2020–2024)
Member: American Association for the Advancement of Science, American Ornithological Society (elected), Wildlife Disease Association
Reviewer: more than 40 journal outlets
Science and Products
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Filter Total Items: 119
Introduction of Eurasian-origin H8N4 influenza A virus into North America via migratory birds Introduction of Eurasian-origin H8N4 influenza A virus into North America via migratory birds
We identified a Eurasian-origin influenza A(H8N4) virus in North America by sampling wild birds in western Alaska, USA. Evidence for repeated introductions of influenza A viruses into North America by migratory birds suggests that intercontinental dispersal might not be exceedingly rare and that our understanding of viral establishment is incomplete.
Authors
Andrew M. Ramey, Andrew B. Reeves, Tyrone F. Donnelly, Rebecca L. Poulson, David E. Stallknecht
Genetic evidence supports sporadic and independent introductions of subtype H5 low pathogenic avian influenza A viruses from wild birds to domestic poultry in North America Genetic evidence supports sporadic and independent introductions of subtype H5 low pathogenic avian influenza A viruses from wild birds to domestic poultry in North America
Wild bird–origin influenza A viruses (IAVs or avian influenza) have led to sporadic outbreaks among domestic poultry in the United States (US) and Canada, resulting in economic losses through the implementation of costly containment practices and destruction of birds. We used evolutionary analyses of virus sequence data to determine that 78 H5 low pathogenic avian influenza viruses...
Authors
Lei Li, Andrew S. Bowman, Thomas J. DeLiberto, Mary L. Killian, Scott Krauss, Jacqueline M. Nolting, Mia Kim Torchetti, Andrew M. Ramey, Andrew B. Reeves, David E. Stallknecht, Richard J. Webby, Xiu-Feng Wan
Evidence for haemosporidian parasite infections in Spectacled Eiders (Somateria fischeri) sampled in Alaska during the breeding season Evidence for haemosporidian parasite infections in Spectacled Eiders (Somateria fischeri) sampled in Alaska during the breeding season
We assessed hematozoa infection in Spectacled Eiders (Somateria fischeri) at two areas in Alaska. No Haemoproteus or Plasmodium species were detected. Leucocytozoon prevalence was 6.5% for adults across sites and 41.9% for juveniles sampled in the Arctic, providing evidence for local transmission. All Leucocytozoon haplotypes were previously detected in waterfowl.
Authors
John A. Reed, Matthew G. Sexson, Matthew M. Smith, Joel A. Schmutz, Andrew M. Ramey
Acquisition and dissemination of cephalosporin-resistant E. coli in migratory birds sampled at an Alaska landfill as inferred through genomic analysis Acquisition and dissemination of cephalosporin-resistant E. coli in migratory birds sampled at an Alaska landfill as inferred through genomic analysis
Antimicrobial resistance (AMR) in bacterial pathogens threatens global health, though the spread of AMR bacteria and AMR genes between humans, animals, and the environment is still largely unknown. Here, we investigated the role of wild birds in the epidemiology of AMR Escherichia coli. Using next-generation sequencing, we characterized cephalosporin-resistant E. coli cultured from...
Authors
Christina Ann Ahlstrom, Jonas Bonnedahl, Hanna Woksepp, Jorge Hernandez, Olsen Bjorn, Andrew M. Ramey
Influenza A virus recovery, diversity, and intercontinental exchange: A multi-year assessment of wild bird sampling at Izembek National Wildlife Refuge, Alaska Influenza A virus recovery, diversity, and intercontinental exchange: A multi-year assessment of wild bird sampling at Izembek National Wildlife Refuge, Alaska
Western Alaska is a potential point-of-entry for foreign-origin influenza A viruses (IAVs) into North America via migratory birds. We sampled waterfowl and gulls for IAVs at Izembek National Wildlife Refuge (NWR) in western Alaska, USA, during late summer and autumn months of 2011–2015, to evaluate the abundance and diversity of viruses at this site. We collected 4842 samples across five...
Authors
Andrew B. Reeves, Jeffery S. Hall, Rebecca L. Poulson, Tyrone F. Donnelly, David E. Stallknecht, Andrew M. Ramey
Lessons learned from research and surveillance directed at highly pathogenic influenza A viruses in wild birds inhabiting North America Lessons learned from research and surveillance directed at highly pathogenic influenza A viruses in wild birds inhabiting North America
Following detections of highly pathogenic (HP) influenza A viruses (IAVs) in wild birds inhabiting East Asia after the turn of the millennium, the intensity of sampling of wild birds for IAVs increased throughout much of North America. The objectives for many research and surveillance efforts were directed towards detecting Eurasian origin HP IAVs and understanding the potential of such...
Authors
Andrew M. Ramey, Thomas J. DeLiberto, Yohannes Berhane, David E. Swayne, David E. Stallknecht
Antibiotic-resistant Escherichia coli in migratory birds inhabiting remote Alaska Antibiotic-resistant Escherichia coli in migratory birds inhabiting remote Alaska
We explored the abundance of antibiotic-resistant Escherichia coli among migratory birds at remote sites in Alaska and used a comparative approach to speculate on plausible explanations for differences in detection among species. At a remote island site, we detected antibiotic-resistant E. coli phenotypes in samples collected from glaucous-winged gulls (Larus glaucescens), a species...
Authors
Andrew M. Ramey, Jorge Hernandez, Veronica Tyrlov, Brian D. Uher-Koch, Joel A. Schmutz, Clara Atterby, Josef D. Jarhult, Jonas Bonnedahl
Vectors, hosts, and control measures for Zika virus in the Americas Vectors, hosts, and control measures for Zika virus in the Americas
We examine Zika virus (ZIKV) from an ecological perspective and with a focus on the Americas. We assess (1) the role of wildlife in ZIKV disease ecology, (2) how mosquito behavior and biology influence disease dynamics, and (3) how nontarget species and ecosystems may be impacted by vector control programs. Our review suggests that free-ranging, non-human primates may be involved in ZIKV
Authors
Sarah J. Thompson, John M. Pearce, Andrew M. Ramey
Environmental and behavioral changes may influence the exposure of an Arctic apex predator to pathogens and contaminants Environmental and behavioral changes may influence the exposure of an Arctic apex predator to pathogens and contaminants
Recent decline of sea ice habitat has coincided with increased use of land by polar bears (Ursus maritimus) from the southern Beaufort Sea (SB), which may alter the risks of exposure to pathogens and contaminants. We assayed blood samples from SB polar bears to assess prior exposure to the pathogens Brucella spp., Toxoplasma gondii, Coxiella burnetii, Francisella tularensis, and Neospora...
Authors
Todd C. Atwood, Colleen G. Duncan, Kelly A. Patyk, Pauline Nol, Jack Rhyan, Matthew McCollum, Melissa A. McKinney, Andrew M. Ramey, Camila Cerqueira-Cezar, Oliver C H Kwok, Jitender P Dubey, S.G. Hennager
Surveillance for highly pathogenic influenza A viruses in California during 2014–2015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway Surveillance for highly pathogenic influenza A viruses in California during 2014–2015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway
We used surveillance data collected in California before, concurrent with, and subsequent to an outbreak of highly pathogenic (HP) clade 2.3.4.4 influenza A viruses (IAVs) in 2014–2015 to (i) evaluate IAV prevalence in waterfowl, (ii) assess the evidence for spill-over infections in marine mammals and (iii) genetically characterize low-pathogenic (LP) and HP IAVs to refine inference on...
Authors
Andrew M. Ramey, Nichola J. Hill, Troy Cline, Magdalena Plancarte, Susan De La Cruz, Michael L. Casazza, Joshua T. Ackerman, Joseph P. Fleskes, T. Winston Vickers, Andrew B. Reeves, Frances Gulland, Christine Fontaine, Diann J. Prosser, Jonathan Runstadler, Walter M. Boyce
Maintenance of influenza A viruses and antibody response in mallards (Anas platyrhynchos) sampled during the non-breeding season in Alaska Maintenance of influenza A viruses and antibody response in mallards (Anas platyrhynchos) sampled during the non-breeding season in Alaska
Prevalence of influenza A virus (IAV) infections in northern-breeding waterfowl has previously been reported to reach an annual peak during late summer or autumn; however, little is known about IAV infection dynamics in waterfowl populations persisting at high-latitude regions such as Alaska, during winter. We captured mallards (Anas platyrhynchos) throughout the non-breeding season...
Authors
Timothy J. Spivey, Mark S. Lindberg, Brandt W. Meixell, Kyle R. Smith, Wendy Blay Puryear, Kimberly R. Davis, Jonathan A. Runstadler, David E. Stallknecht, Andrew M. Ramey
A genetic signature of the evolution of loss of flight in the Galapagos cormorant A genetic signature of the evolution of loss of flight in the Galapagos cormorant
INTRODUCTION Changes in the size and proportion of limbs and other structures have played a key role in the evolution of species. One common class of limb modification is recurrent wing reduction and loss of flight in birds. Indeed, Darwin used the occurrence of flightless birds as an argument in favor of his theory of natural selection. Loss of flight has evolved repeatedly and is found...
Authors
Alejandro Burga, Weiguang Wang, Eyal Ben-David, Paul C. Wolf, Andrew M. Ramey, Claudio Verdugo, Karen Lyons, Patricia G. Parker, Leonid Kruglyak
Science and Products
Filter Total Items: 13
Filter Total Items: 31
No Result Found
Filter Total Items: 119
Introduction of Eurasian-origin H8N4 influenza A virus into North America via migratory birds Introduction of Eurasian-origin H8N4 influenza A virus into North America via migratory birds
We identified a Eurasian-origin influenza A(H8N4) virus in North America by sampling wild birds in western Alaska, USA. Evidence for repeated introductions of influenza A viruses into North America by migratory birds suggests that intercontinental dispersal might not be exceedingly rare and that our understanding of viral establishment is incomplete.
Authors
Andrew M. Ramey, Andrew B. Reeves, Tyrone F. Donnelly, Rebecca L. Poulson, David E. Stallknecht
Genetic evidence supports sporadic and independent introductions of subtype H5 low pathogenic avian influenza A viruses from wild birds to domestic poultry in North America Genetic evidence supports sporadic and independent introductions of subtype H5 low pathogenic avian influenza A viruses from wild birds to domestic poultry in North America
Wild bird–origin influenza A viruses (IAVs or avian influenza) have led to sporadic outbreaks among domestic poultry in the United States (US) and Canada, resulting in economic losses through the implementation of costly containment practices and destruction of birds. We used evolutionary analyses of virus sequence data to determine that 78 H5 low pathogenic avian influenza viruses...
Authors
Lei Li, Andrew S. Bowman, Thomas J. DeLiberto, Mary L. Killian, Scott Krauss, Jacqueline M. Nolting, Mia Kim Torchetti, Andrew M. Ramey, Andrew B. Reeves, David E. Stallknecht, Richard J. Webby, Xiu-Feng Wan
Evidence for haemosporidian parasite infections in Spectacled Eiders (Somateria fischeri) sampled in Alaska during the breeding season Evidence for haemosporidian parasite infections in Spectacled Eiders (Somateria fischeri) sampled in Alaska during the breeding season
We assessed hematozoa infection in Spectacled Eiders (Somateria fischeri) at two areas in Alaska. No Haemoproteus or Plasmodium species were detected. Leucocytozoon prevalence was 6.5% for adults across sites and 41.9% for juveniles sampled in the Arctic, providing evidence for local transmission. All Leucocytozoon haplotypes were previously detected in waterfowl.
Authors
John A. Reed, Matthew G. Sexson, Matthew M. Smith, Joel A. Schmutz, Andrew M. Ramey
Acquisition and dissemination of cephalosporin-resistant E. coli in migratory birds sampled at an Alaska landfill as inferred through genomic analysis Acquisition and dissemination of cephalosporin-resistant E. coli in migratory birds sampled at an Alaska landfill as inferred through genomic analysis
Antimicrobial resistance (AMR) in bacterial pathogens threatens global health, though the spread of AMR bacteria and AMR genes between humans, animals, and the environment is still largely unknown. Here, we investigated the role of wild birds in the epidemiology of AMR Escherichia coli. Using next-generation sequencing, we characterized cephalosporin-resistant E. coli cultured from...
Authors
Christina Ann Ahlstrom, Jonas Bonnedahl, Hanna Woksepp, Jorge Hernandez, Olsen Bjorn, Andrew M. Ramey
Influenza A virus recovery, diversity, and intercontinental exchange: A multi-year assessment of wild bird sampling at Izembek National Wildlife Refuge, Alaska Influenza A virus recovery, diversity, and intercontinental exchange: A multi-year assessment of wild bird sampling at Izembek National Wildlife Refuge, Alaska
Western Alaska is a potential point-of-entry for foreign-origin influenza A viruses (IAVs) into North America via migratory birds. We sampled waterfowl and gulls for IAVs at Izembek National Wildlife Refuge (NWR) in western Alaska, USA, during late summer and autumn months of 2011–2015, to evaluate the abundance and diversity of viruses at this site. We collected 4842 samples across five...
Authors
Andrew B. Reeves, Jeffery S. Hall, Rebecca L. Poulson, Tyrone F. Donnelly, David E. Stallknecht, Andrew M. Ramey
Lessons learned from research and surveillance directed at highly pathogenic influenza A viruses in wild birds inhabiting North America Lessons learned from research and surveillance directed at highly pathogenic influenza A viruses in wild birds inhabiting North America
Following detections of highly pathogenic (HP) influenza A viruses (IAVs) in wild birds inhabiting East Asia after the turn of the millennium, the intensity of sampling of wild birds for IAVs increased throughout much of North America. The objectives for many research and surveillance efforts were directed towards detecting Eurasian origin HP IAVs and understanding the potential of such...
Authors
Andrew M. Ramey, Thomas J. DeLiberto, Yohannes Berhane, David E. Swayne, David E. Stallknecht
Antibiotic-resistant Escherichia coli in migratory birds inhabiting remote Alaska Antibiotic-resistant Escherichia coli in migratory birds inhabiting remote Alaska
We explored the abundance of antibiotic-resistant Escherichia coli among migratory birds at remote sites in Alaska and used a comparative approach to speculate on plausible explanations for differences in detection among species. At a remote island site, we detected antibiotic-resistant E. coli phenotypes in samples collected from glaucous-winged gulls (Larus glaucescens), a species...
Authors
Andrew M. Ramey, Jorge Hernandez, Veronica Tyrlov, Brian D. Uher-Koch, Joel A. Schmutz, Clara Atterby, Josef D. Jarhult, Jonas Bonnedahl
Vectors, hosts, and control measures for Zika virus in the Americas Vectors, hosts, and control measures for Zika virus in the Americas
We examine Zika virus (ZIKV) from an ecological perspective and with a focus on the Americas. We assess (1) the role of wildlife in ZIKV disease ecology, (2) how mosquito behavior and biology influence disease dynamics, and (3) how nontarget species and ecosystems may be impacted by vector control programs. Our review suggests that free-ranging, non-human primates may be involved in ZIKV
Authors
Sarah J. Thompson, John M. Pearce, Andrew M. Ramey
Environmental and behavioral changes may influence the exposure of an Arctic apex predator to pathogens and contaminants Environmental and behavioral changes may influence the exposure of an Arctic apex predator to pathogens and contaminants
Recent decline of sea ice habitat has coincided with increased use of land by polar bears (Ursus maritimus) from the southern Beaufort Sea (SB), which may alter the risks of exposure to pathogens and contaminants. We assayed blood samples from SB polar bears to assess prior exposure to the pathogens Brucella spp., Toxoplasma gondii, Coxiella burnetii, Francisella tularensis, and Neospora...
Authors
Todd C. Atwood, Colleen G. Duncan, Kelly A. Patyk, Pauline Nol, Jack Rhyan, Matthew McCollum, Melissa A. McKinney, Andrew M. Ramey, Camila Cerqueira-Cezar, Oliver C H Kwok, Jitender P Dubey, S.G. Hennager
Surveillance for highly pathogenic influenza A viruses in California during 2014–2015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway Surveillance for highly pathogenic influenza A viruses in California during 2014–2015 provides insights into viral evolutionary pathways and the spatiotemporal extent of viruses in the Pacific Americas Flyway
We used surveillance data collected in California before, concurrent with, and subsequent to an outbreak of highly pathogenic (HP) clade 2.3.4.4 influenza A viruses (IAVs) in 2014–2015 to (i) evaluate IAV prevalence in waterfowl, (ii) assess the evidence for spill-over infections in marine mammals and (iii) genetically characterize low-pathogenic (LP) and HP IAVs to refine inference on...
Authors
Andrew M. Ramey, Nichola J. Hill, Troy Cline, Magdalena Plancarte, Susan De La Cruz, Michael L. Casazza, Joshua T. Ackerman, Joseph P. Fleskes, T. Winston Vickers, Andrew B. Reeves, Frances Gulland, Christine Fontaine, Diann J. Prosser, Jonathan Runstadler, Walter M. Boyce
Maintenance of influenza A viruses and antibody response in mallards (Anas platyrhynchos) sampled during the non-breeding season in Alaska Maintenance of influenza A viruses and antibody response in mallards (Anas platyrhynchos) sampled during the non-breeding season in Alaska
Prevalence of influenza A virus (IAV) infections in northern-breeding waterfowl has previously been reported to reach an annual peak during late summer or autumn; however, little is known about IAV infection dynamics in waterfowl populations persisting at high-latitude regions such as Alaska, during winter. We captured mallards (Anas platyrhynchos) throughout the non-breeding season...
Authors
Timothy J. Spivey, Mark S. Lindberg, Brandt W. Meixell, Kyle R. Smith, Wendy Blay Puryear, Kimberly R. Davis, Jonathan A. Runstadler, David E. Stallknecht, Andrew M. Ramey
A genetic signature of the evolution of loss of flight in the Galapagos cormorant A genetic signature of the evolution of loss of flight in the Galapagos cormorant
INTRODUCTION Changes in the size and proportion of limbs and other structures have played a key role in the evolution of species. One common class of limb modification is recurrent wing reduction and loss of flight in birds. Indeed, Darwin used the occurrence of flightless birds as an argument in favor of his theory of natural selection. Loss of flight has evolved repeatedly and is found...
Authors
Alejandro Burga, Weiguang Wang, Eyal Ben-David, Paul C. Wolf, Andrew M. Ramey, Claudio Verdugo, Karen Lyons, Patricia G. Parker, Leonid Kruglyak
*Disclaimer: Listing outside positions with professional scientific organizations on this Staff Profile are for informational purposes only and do not constitute an endorsement of those professional scientific organizations or their activities by the USGS, Department of the Interior, or U.S. Government