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Publications

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Compensatory effects of recruitment and survival when amphibian populations are perturbed by disease Compensatory effects of recruitment and survival when amphibian populations are perturbed by disease

The need to increase our understanding of factors that regulate animal population dynamics has been catalysed by recent, observed declines in wildlife populations worldwide. Reliable estimates of demographic parameters are critical for addressing basic and applied ecological questions and understanding the response of parameters to perturbations (e.g. disease, habitat loss, climate...
Authors
E. Muths, R. D. Scherer, D. S. Pilliod

Multiplexed microsatellite recovery using massively parallel sequencing Multiplexed microsatellite recovery using massively parallel sequencing

Conservation and management of natural populations requires accurate and inexpensive genotyping methods. Traditional microsatellite, or simple sequence repeat (SSR), marker analysis remains a popular genotyping method because of the comparatively low cost of marker development, ease of analysis and high power of genotype discrimination. With the availability of massively parallel...
Authors
T.N. Jennings, B.J. Knaus, T.D. Mullins, S. M. Haig, R.C. Cronn

Persistent effects of wildfire and debris flows on the invertebrate prey base of rainbow trout in Idaho streams Persistent effects of wildfire and debris flows on the invertebrate prey base of rainbow trout in Idaho streams

Wildfire and debris flows are important physical and ecological drivers in headwater streams of western North America. Past research has primarily examined short-term effects of these disturbances; less is known about longer-term impacts. We investigated wildfire effects on the invertebrate prey base for drift-feeding rainbow trout (Oncorhynchus mykiss, Walbaum) in Idaho headwater...
Authors
A.E. Rosenberger, J. B. Dunham, J.M. Buffington, M.S. Wipfli

Flow regime, temperature, and biotic interactions drive differential declines of trout species under climate change Flow regime, temperature, and biotic interactions drive differential declines of trout species under climate change

Broad-scale studies of climate change effects on freshwater species have focused mainly on temperature, ignoring critical drivers such as flow regime and biotic interactions. We use downscaled outputs from general circulation models coupled with a hydrologic model to forecast the effects of altered flows and increased temperatures on four interacting species of trout across the interior...
Authors
S.J. Wenger, D.J. Isaak, C.H. Luce, H.M. Neville, K.D. Fausch, J. B. Dunham, D.C. Dauwalter, M.K. Young, M.M. Elsner, B.E. Rieman, A.F. Hamlet, J.E. Williams

Molecular insights into the biology of Greater Sage-Grouse Molecular insights into the biology of Greater Sage-Grouse

Recent research on Greater Sage-Grouse (Centrocercus urophasianus) genetics has revealed some important findings. First, multiple paternity in broods is more prevalent than previously thought, and leks do not comprise kin groups. Second, the Greater Sage-Grouse is genetically distinct from the congeneric Gunnison sage-grouse (C. minimus). Third, the Lyon-Mono population in the Mono Basin...
Authors
Sara J. Oyler-McCance, Thomas W. Quinn

Influences of the human footprint on sagebrush landscape patterns: Implications for sage-grouse conservation Influences of the human footprint on sagebrush landscape patterns: Implications for sage-grouse conservation

Spatial patterns influence the processes that maintain Greater Sage-Grouse (Centrocercus urophasianus) populations and sagebrush (Artemisia spp.) landscapes on which they depend. We used connectivity analyses to: (1) delineate the dominant pattern of sagebrush landscapes; (2) identify regions of the current range-wide distribution of Greater Sage-Grouse important for conservation; (3)...
Authors
Matthias Leu, Steven E. Hanser

Using multilevel spatial models to understand salamander site occupancy patterns after wildfire Using multilevel spatial models to understand salamander site occupancy patterns after wildfire

Studies of the distribution of elusive forest wildlife have suffered from the confounding of true presence with the uncertainty of detection. Occupancy modeling, which incorporates probabilities of species detection conditional on presence, is an emerging approach for reducing observation bias. However, the current likelihood modeling framework is restrictive for handling unexplained...
Authors
Nathan Chelgren, M. J. Adams, Larissa L. Bailey, R. Bruce Bury

δ15N constraints on long-term nitrogen balances in temperate forests δ15N constraints on long-term nitrogen balances in temperate forests

Biogeochemical theory emphasizes nitrogen (N) limitation and the many factors that can restrict N accumulation in temperate forests, yet lacks a working model of conditions that can promote naturally high N accumulation. We used a dynamic simulation model of ecosystem N and δ15N to evaluate which combination of N input and loss pathways could produce a range of high ecosystem N contents
Authors
S.S. Perakis, E.R. Sinkhorn, J.E. Compton

Food availability is expressed through physiological stress indicators in nestling white ibis: A food supplementation experiment Food availability is expressed through physiological stress indicators in nestling white ibis: A food supplementation experiment

1.Physiological responses to environmental stress such as adrenocortical hormones and cellular stress proteins have recently emerged as potentially powerful tools for investigating physiological effects of avian food limitation. However, little is known about the physiological stress responses of free‐living nestling birds to environmental variation in food availability. 2. We...
Authors
Garth Herring, Mark I. Cook, D.E. Gawlik, Erynn M. Call

Seasonal movement, residency, and migratory patterns of Wilson's Snipe (Gallinago delicata) Seasonal movement, residency, and migratory patterns of Wilson's Snipe (Gallinago delicata)

Cross-seasonal studies of avian movement establish links between geographically distinct wintering, breeding, and migratory stopover locations, or assess site fidelity and movement between distinct phases of the annual cycle. Far fewer studies have investigated individual movement patterns within and among seasons over an annual cycle. Within western Oregon's Willamette Valley throughout...
Authors
Brittany B. Cline, Susan M. Haig

Effects of nitrogen deposition and empirical nitrogen critical loads for ecoregions of the United States Effects of nitrogen deposition and empirical nitrogen critical loads for ecoregions of the United States

Human activity in the last century has led to a significant increase in nitrogen (N) emissions and atmospheric deposition. This N deposition has reached a level that has caused or is likely to cause alterations to the structure and function of many ecosystems across the United States. One approach for quantifying the deposition of pollution that would be harmful to ecosystems is the...
Authors
L.H. Pardo, M.E. Fenn, C.L. Goodale, L.H. Geiser, C. T. Driscoll, E.B. Allen, Jill Baron, R. Bobbink, W.D. Bowman, C.M. Clark, B. Emmett, F.S. Gilliam, T.L. Greaver, S.J. Hall, E.A. Lilleskov, L. Liu, J.A. Lynch, K.J. Nadelhoffer, S.S. Perakis, M. J. Robin-Abbott, J.L. Stoddard, K.C. Weathers, R.L. Dennis

Seasonal movements and environmental triggers to fall migration of Sage Sparrows Seasonal movements and environmental triggers to fall migration of Sage Sparrows

Post-breeding ecology of shrubland passerines prior to onset of migration is unknown relative to dynamics of breeding areas. We radiomarked and monitored 38 Sage Sparrows (Amphispiza belli ssp. nevadensis) at one site in Oregon and two in Nevada from September to mid-November 2007 to track local movements, estimate seasonal range sizes, and characterize weather patterns triggering onset...
Authors
K.A. Fesenmyer, S.T. Knick
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