Publications

Several species of ciscoes Coregonus, subgenus Leucichthys that are native to the Laurentian Great Lakes are rare or extirpated. The restoration of Coregonus fishes is being actively pursued through stocking, and success may depend on the availability of unoccupied niche space. We described the spring–summer habitat occupancy and diets of three native cisco species (Bloater Coregonus...

Shoreline sand harbors high concentrations of fecal indicator bacteria (FIB) that may be resuspended into the water column through washing and resuspension. Studies have explored coastal processes that influence this sand-water flux for FIB, but little is known about how microbial markers of contamination or the bacterial community interact in the sand-water interface. In this study, we...

The American eel (Anguilla rostrata ) is an imperilled fish hypothesized to use conspecific cues, in part, to coordinate long‐distance migration during their multistage life history. Here, holding water and tissue from multiple American eel life stages was collected and analysed for the presence, profile and concentration of bile acids. Distinct bile acid profiles were identified in...

In Lake Erie, cisco Coregonus artedi once supported one of the most valuable freshwater fisheries on earth, yet overfishing caused their eventual extirpation from the lake. With warming lake temperatures, some have questioned whether Lake Erie still contains suitable oxythermal conditions for cisco. Using published oxythermal thresholds for cisco and oxythermal profiles from Lake Erie...

Native lake trout and introduced Chinook salmon, coho salmon, steelhead, and brown trout are major predators in Lake Michigan’s complex ecosystem and collectively support a valuable recreational fishery, but declines in their primary prey, alewife, have raised ecological and management concerns about competition and prey allocation. We applied niche overlap analysis to evaluate...

Reduced representation (RRL) sequencing approaches (e.g., RADSeq, genotyping by sequencing) require decisions about how much to invest in genome coverage and sequencing depth, as well as choices of values for adjustable bioinformatics parameters. To empirically explore the importance of these “simple” methodological decisions, we generated two independent sequencing libraries for the...

Use of the first fish pheromone biopesticide, 3-keto petromyzonol sulfate (3kPZS) in sea lamprey (Petromyzon marinus) control requires an understanding of both how the amount 3kPZS applied to a trap relates to catch, and how that relationship varies among stream types. By conducting 3kPZS dose-response experiments over two years and across six varied trapping contexts, we conclude (1)...

Genomic tools are lacking for invasive and native populations of sea lamprey (Petromyzon marinus). Our objective was to discover single nucleotide polymorphism (SNP) loci to conduct pedigree analyses to quantify reproductive contributions of adult sea lampreys and dispersion of sibling larval sea lampreys of different ages in Great Lakes tributaries. Additional applications of data were...

Transitional areas between ecosystem types are often active biogeochemically due to resource limitation changes. Lotic-to-lentic transitions in freshwaters appear active biogeochemically, but few studies have directly measured nutrient processing rates to assess whether processing within the rivermouth is important for load estimates or the local communities. We measured oxic fluxes of...

Environmental breakdown of plastics produces synthetic microfibers, a class of microplastics that are most prevalent in surface waters. A main source of these pollutants is wastewater treatment plants which discharge into surface waters, including those that flow into Lake Michigan. Microplastics can settle into aquatic sediment or exist for lengths of time in the swash zone of the lakes...

Abundance estimates facilitate successful fisheries management. Fisheries agencies often monitor abundance through fishery independent standardized protocols generating relative measures such as catch-per-unit-effort (CPUE), where CPUE is assumed proportional to true abundance. Unfortunately, this assumption is rarely met as fish behavior and environmental conditions influence...

Scientists from the U.S. Geological Survey’s Great Lakes Science Center conducted integrated acoustic and mid-water trawl surveys of Lake Huron annually from 2004-2018. The 2018 survey was conducted during September and included transects in Lake Huron’s main basin, Georgian Bay, and North Channel. Mean lake-wide pelagic fish density was 1532 fish/ha and mean pelagic fish biomass was...