Data
UMESC Data
Long Term Resource Monitoring
Long Term Resource Monitoring
The LTRM element is one of two components of the federally mandated Upper Mississippi River Restoration Program.
ScienceBase
ScienceBase
ScienceBase is data and information management infrastructure that enables data upload, documentation, sharing, and dynamic data services using standards-compliant methods and technological components. ScienceBase furnishes a foundation for data stewardship, government open data, and scientific discovery.
Filter Total Items: 483
Data to quantify ecosystem states and state transitions of the Upper Mississippi River using topological data analysis Data to quantify ecosystem states and state transitions of the Upper Mississippi River using topological data analysis
The dataset and analysis scripts accompanies the scientific article, "Quantifying ecosystem states and state transitions of the Upper Mississippi River using topological data analysis." We coupled this highly dimensional dataset with multiple topological data analysis (TDA) techniques to classify ecosystem states, identify state variables, and detect state transitions over 30 years.
Data Release for Laboratory and field comparisons of TFM bar formulations used to treat small streams for larval sea lamprey Data Release for Laboratory and field comparisons of TFM bar formulations used to treat small streams for larval sea lamprey
The dataset was generated to verify the suitability of the new TFM bar formulation for wide-scale use in the Sea Lamprey Control Program (SLCP). Dataset includes TFM concentrations of three streams (each used twice) where randomized experimental applications of new and old TFM bar formulation dissolution trials were conducted, TFM concentrations of 12 laboratory flume experimental...
Toxicity Testing Review, Derived from published literature and reports Toxicity Testing Review, Derived from published literature and reports
The dataset is derived from a search of published books, papers, and reports on toxicity studies with Dreissena spp. mussels. Specific information was extracted from each paper on the study design, collection, handling, test methods, and reporting parameters.
Acoustic Telemetry Evaluation of Invasive Carp in Kaukauna, Wisconsin (Summer 2019) Acoustic Telemetry Evaluation of Invasive Carp in Kaukauna, Wisconsin (Summer 2019)
This study deployed acoustic telemetry at the Fox River Navigational System Authority (FRNSA) in lock #2 and the upstream and downstream pools in Kaukauna, WI to document movements and behavior of telemetered fish species in response to injection of carbon dioxide. Telemetry equipment was setup in the test area for approximately 2 months during the summer of 2019. CSV metadata includes...
Application of the SEICarP Model to the Illinois River Application of the SEICarP Model to the Illinois River
This repository contains code to run the Spatially Explicit Invasive Carp Population (SEICarP) model in the Illinois Rive. The code uses the `SEICarP` R package. The code for this project assumes the reader is familiar with R, population modeling, and quantitative fisheries methods.
SEIcarP SEIcarP
SEIcarP is an R package (R Core Team 2021) implementing the Spatially Explicit Invasive Carp (SEICarP; sometimes stylize as SEIcarP) population model for the Illinois River. This repository contains the SEIcarP model plus two additional packages required for the main model package to run. These are the SEIcarP Bighead Carp (BH) data (SEIcarPdataBHCP) and the SEIcarP Silver Carp (SV) data
Example application of MetaIPM to the Illinois River Example application of MetaIPM to the Illinois River
This repository contains an example application of the `Meta-IPM` Python package (https://doi.org/10.5066/P9PW673G). The specific application focuses on the Illinois River using existing public data.
Indiana mussel metabolomics data analysis Indiana mussel metabolomics data analysis
This repository contains code to cluster a sample of Mussels based up their metabolic levels via Non-Metric Multidimensional Scaling (NMDS) and distance based-Redundancy Analysis (db-RDA). Mussel sample is broken down and examined by catch location, sex, and species. The code for this project assumes the reader is familiar with R and clustering techniques.
Characterization of occurrence and abundance of targeted metabolites in unionid mussels from three streams Characterization of occurrence and abundance of targeted metabolites in unionid mussels from three streams
The data consists of targeted metabolite analysis (using quadrupole time-of-flight mass spectroscopy;UHPLC-QTOF-MS) of hemolymph from two freshwater mussel species (Lampsilis cardium and L. siliquoidea) from three streams in Indiana. Concentrations of metabolites were modeled by species, stream and sex to determine the influence of each parameter.
Calculations of BioLake climate data Calculations of BioLake climate data
Climate data allow people to examine species distributions and possible distributions. This script takes ERA5-Land climate estimates (https://www.ecmwf.int/en/forecasts/datasets/reanalysis-datasets/era5) for precipitation and lake temperature and processes them to create summary climate layers for use with biological organisms in lakes. This code could be modified to use a different...
BioLake bioclimatic variables based on ERA5-Land lake temperature estimates 1991-2020 BioLake bioclimatic variables based on ERA5-Land lake temperature estimates 1991-2020
These BioLake raster data provide global estimates (~10.0 x 12.4 km resolution) of twelve bioclimatic variables based on estimated lake temperature. Eleven of these twelve variables (BioLake01 - BioLake11) are estimated for each of three lake strata: lake mix (surface) layer, lake bottom, and total lake water column. These eleven variables correspond to CHELSA (Climatologies at high...
Kinnickinnic River Geochemistry and Rapid Geomorphic Assessments, Waukesha County, Wisconsin Kinnickinnic River Geochemistry and Rapid Geomorphic Assessments, Waukesha County, Wisconsin
From September 2019 to October 2020 a stream sediment budget and sediment fingerprinting integrated study was conducted to quantify upland and stream corridor sources of suspended sediment and sediment-bound phosphorus using the Sediment Source Assessment Tool (SedSAT) methods with a suite of trace elements. Upland source samples were collected at 45 randomly selected sites in the...