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Hydroacoustic mapping of physical habitat for imperiled freshwater mussels in the St. Croix River (ver. 2.0, February 2025) Hydroacoustic mapping of physical habitat for imperiled freshwater mussels in the St. Croix River (ver. 2.0, February 2025)

Recent advances in hydroacoustic technology are proving to be valuable tools for mapping habitat features for sedentary biota such as freshwater mussels, and has the potential to identify and quantify habitat features. The Spectaclecase (Margaritifera monodonta) and Salamander (Simpsonaias ambigua) are imperiled mussels that are typically associated with rock structures (e.g., wing dams...

Common loon migration and winter data: telemetry locations and archival geolocator tag location (ver 2.0, October 2022) Common loon migration and winter data: telemetry locations and archival geolocator tag location (ver 2.0, October 2022)

The data details common loon locations based on archival geolocator tag information, characteristics of common loon dives during wintering, and common loon locations based on telemetry data. Satellite transmitters (Model PTT-100, Microwave Telemetry, Inc) were implanted in 31 adult male (marked during July 2010 and July 2011) and 27 juvenile (marked during August 2014 and August 2015)...

Bat demographic look up tables for BatTool R package Bat demographic look up tables for BatTool R package

Demographic look up tables allow the translation of a population growth rate, which is estimable from count data, to a set of vital rates parameterizing the birth and survival processes of the population. These tables are used in the BatTool R package to produce realistic simulations of population abundance trajectories given a range of population growth rates.

BatTool R package BatTool R package

This R package was developed to help the USFWS understand the effects of wind turbine mortality and WNS on the Indiana bat. The model has been described in a peer-reviewd (and open access publication). The package includes both a GUI and command line interface. The GUI only works for Myotis spp., although the command line tool has been expanded for two other genera of bats: Lasiurus spp...

Behavioral and Reproductive Effects of the Lampricides TFM and TFM:1% Niclosamide on Native Freshwater Mussels - SPSS Code Release Behavioral and Reproductive Effects of the Lampricides TFM and TFM:1% Niclosamide on Native Freshwater Mussels - SPSS Code Release

This study continues our investigations into the effects of lampricides on mussels by extending research into potential effects on behavioral and reproductive endpoints on the mussel plain pocketbook (Lampsilis cardium). We hypothesized that TFM and TFM:NIC would reduce the viability of free glochidia in a dose-dependent manner, that older glochidia would be more sensitive than younger...

Aerial thermal imagery of the Central Platte River Valley and bounding box annotations of sandhill cranes Aerial thermal imagery of the Central Platte River Valley and bounding box annotations of sandhill cranes

Aerial thermal imagery was collected over the Central Platte River Valley, Nebraska, USA. Bounding box annotations were manually created for the purpose of machine learning tasks to automate the detection of sandhill cranes. Mosaicking of the thermal imagery was complete to assemble the individual images into a single, geo-referenced image.

High-throughput calculations of climatch scores High-throughput calculations of climatch scores

Matching climate envelopes allows people to examine how potential invasive species may match habitats. This repository contains code for using the climatchR package for high-throughput calculations of climatch scores for species using GBIF data. Climatch is based upon the climatch algorithm as implemented through the climatchR package.

Analysis code for Quantitative method development to determine feed consumption using a dye Analysis code for Quantitative method development to determine feed consumption using a dye

This repository contains code for the analysis of Wamboldt JJ, Nelson JE, Thomas LM, Steiner JN, Hebert JL, Erickson RA, Putnam JG. Quantitative method development to determine feed consumption using a dye. North American Journal of Aquaculture The purpose of the repository is to document what analysis was run for publication and is intended for an archive rather than a production or...

Data release for Quantitative method development to determine feed consumption using a dye Data release for Quantitative method development to determine feed consumption using a dye

The goal of this study was to develop a simple, cost effective method to mark fish through oral delivery of an indicator that could be qualitatively and quantitively assessed based on consumption. Our objectives were to 1) determine the concentration of orally administered Sudan Black B required for qualitative confirmation of ingestion, 2) trace the biodistribution of Sudan Black B in...

Water-surface profile map files for the Mississippi River near Prairie Island, Welch, Minnesota, 2019 Water-surface profile map files for the Mississippi River near Prairie Island, Welch, Minnesota, 2019

Four digital water-surface profile maps for a 14-mile reach of the Mississippi River near Prairie Island in Welch, Minnesota from the confluence of the St. Croix River at Prescott, Wisconsin to upstream of the United States Army Corps of Engineers (USACE) Lock and Dam No. 3 in Welch, Minnesota, were created by the U.S. Geological Survey (USGS) in cooperation with the Prairie Island...

PeakFQ input and output files for 299 streamgages in Wisconsin through water year 2020. PeakFQ input and output files for 299 streamgages in Wisconsin through water year 2020.

This dataset includes U.S. Geological Survey (USGS) flood-frequency analysis software PeakFQ input and output files for 299 streamgages in Wisconsin. Input files for each streamgage include peak streamflow data through 2020 and PeakFQ specification files. Output files are text files (.prt) with flood-frequency results.

Mercury Concentrations and Loads in United States and Canadian Tributaries of Lake Superior Mercury Concentrations and Loads in United States and Canadian Tributaries of Lake Superior

In 2021, the U.S. Geological Survey (USGS) Mercury Research Laboratory (MRL) conducted a large-scale assessment of mercury (Hg) concentrations and Hg stable isotope values in tributaries of Lake Superior in order to define the sources and amounts of Hg entering the lake. Water samples were collected monthly from 18 tributaries in the United States from April through October in 2021 and...
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