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Publications

Below is a list of WERC's peer-reviewed publications. If you are searching for a specific publication and cannot find it in this list, please contact werc_web@usgs.gov

Filter Total Items: 3724

Harnessing landscape genomics to identify future climate resilient genotypes in a desert annual Harnessing landscape genomics to identify future climate resilient genotypes in a desert annual

Local adaptation features critically in shaping species responses to changing environments, complicating efforts to revegetate degraded areas. Rapid climate change poses an additional challenge that could reduce fitness of even locally sourced seeds in restoration. Predictive restoration strategies that apply seeds with favourable adaptations to future climate may promote long‐term...
Authors
Daniel F. Shryock, Loraine K Washburn, Lesley A. DeFalco, Todd Esque

Tradeoffs with growth limit host range in complex life-cycle helminths Tradeoffs with growth limit host range in complex life-cycle helminths

Parasitic worms with complex life cycles have several developmental stages, with each stage creating opportunities to infect additional host species. Using a dataset for 973 species of trophically transmitted acanthocephalans, cestodes, and nematodes, we confirmed that worms with longer life cycles (i.e. more successive hosts) infect a greater diversity of host species and taxa (after...
Authors
Daniel P. Benesh, Geoffrey G. Parker, James C Chubb, Kevin D. Lafferty

The distribution of woody species in relation to climate and fire in Yosemite National Park, California, USA The distribution of woody species in relation to climate and fire in Yosemite National Park, California, USA

Background The effects of climate on plant species ranges are well appreciated, but the effects of other processes, such as fire, on plant species distribution are less well understood. We used a dataset of 561 plots 0.1 ha in size located throughout Yosemite National Park, in the Sierra Nevada of California, USA, to determine the joint effects of fire and climate on woody plant species...
Authors
Jan W. van Wagtendonk, Peggy E Moore, Julie L. Yee, James A. Lutz

Multidecadal comparison of Red-footed Booby Sula sula diet at Ulupa'u Crater, O'ahu, Hawai'i Multidecadal comparison of Red-footed Booby Sula sula diet at Ulupa'u Crater, O'ahu, Hawai'i

We describe the diet of Red-footed Boobies Sula sula nesting at Ulupaʻu Crater, Oʻahu, Hawaiʻi based on 106 regurgitations collected during 2014 and 2015. We also compare our results to a diet study at this colony five decades earlier. Both studies indicate that flying squid (Ommastrephidae) and flyingfish (Exocoetidae) are important prey for this population while provisioning chicks. In
Authors
Sarah E. Donahue, Josh Adams, K David Hyrenbach

Genetic analysis of the diet of red‐footed boobies (Sula sula) provisioning chicks at Ulupa'u Crater, O'ahu Genetic analysis of the diet of red‐footed boobies (Sula sula) provisioning chicks at Ulupa'u Crater, O'ahu

The diet of red‐footed boobies (Sula sula) provisioning chicks was quantified using 106 regurgitations collected from 81 adults over two study years with contrasting oceanographic conditions: 2014 and 2015.A total of 1,049 prey items were sorted into three broad categories (fish, squid, and other, consisting of highly‐digested ‘mush’ and parasitic isopods) and assigned a categorical...
Authors
Sarah E. Donahue, Josh Adams, Mark A Renshaw, K David Hyrenbach

Genetic diversity, population structure, and historical demography of a highly vagile and human‐impacted seabird in the Pacific Ocean: The red‐tailed tropicbird, Phaethon rubricauda Genetic diversity, population structure, and historical demography of a highly vagile and human‐impacted seabird in the Pacific Ocean: The red‐tailed tropicbird, Phaethon rubricauda

Many seabird breeding colonies have recovered from heavy anthropogenic disturbance after conservation actions. The widely distributed red‐tailed tropicbird, Phaethon rubricauda, was used as a model species to assess potential anthropogenic impacts on the genetic diversity of breeding colonies in the Pacific Ocean.Cytochrome c oxidase subunit I and control region sequences analyses were...
Authors
Andrea I Varela, Katherina Brokordt, Stefanie M.H. Ismar‐Rebitz, Chris P Gaskin, Nicholas Carlile, Terence O’Dwyer, Josh Adams, Eric A. Vanderwerf, Guillermo Luna‐Jorquera

A manipulative thermal challenge protocol for adult salmonids in remote field settings A manipulative thermal challenge protocol for adult salmonids in remote field settings

Manipulative experiments provide stronger evidence for identifying cause-and-effect relationships than correlative studies, but protocols for implementing temperature manipulations are lacking for large species in remote settings. We developed an experimental protocol for holding adult Chinook salmon (Oncorhynchus tshawytscha) and exposing them to elevated temperature treatments. The...
Authors
Daniel S. Donnelly, Vanessa R. von Biela, Stephen D. McCormick, Sarah M. Laske, Michael P. Carey, Shannon C. Waters-Dynes, Lizabeth Bowen, Randy J Brown, Sean Larson, Christian E. Zimmerman

Transcriptomic response to elevated water temperatures in adult migrating Yukon River Chinook salmon (Oncorhynchus tshawytscha) Transcriptomic response to elevated water temperatures in adult migrating Yukon River Chinook salmon (Oncorhynchus tshawytscha)

Chinook salmon (Oncorhynchus tshawytscha) declines are widespread and may be attributed, at least in part, to warming river temperatures. Water temperatures in the Yukon River and tributaries often exceed 18°C, a threshold commonly associated with heat stress and elevated mortality in Pacific salmon. Untangling the complex web of direct and indirect physiological effects of heat stress...
Authors
Lizabeth Bowen, Vanessa R. von Biela, Stephen D. McCormick, Amy M. Regish, Shannon C. Waters-Dynes, Blythe Durbin-Johnson, Monica Britton, Matt Settles, Daniel S. Donnelly, Sarah M. Laske, Michael P. Carey, Randy J Brown, Christian E. Zimmerman

Impacts of periodic dredging on macroinvertebrate prey availability for benthic foraging fishes in central San Francisco Bay, California Impacts of periodic dredging on macroinvertebrate prey availability for benthic foraging fishes in central San Francisco Bay, California

Background Because of its importance for species covered under Federal Fishery Management Plans (FMPs), the San Francisco Bay (SFB) estuary has been designated as Essential Fish Habitat (EFH) under the Magnuson-Stevens Fishery Conservation and Management Act (MSA; 16 United States Code §18559b). Within this estuary, benthic macroinvertebrate communities provide important prey resources...
Authors
Susan E. W. De La Cruz, Isa Woo, Laurie Hall, Alison Flanagan, Hannah Mittelstaedt

Influenza A viruses remain infectious for more than seven months in northern wetlands of North America Influenza A viruses remain infectious for more than seven months in northern wetlands of North America

In this investigation, we used a combination of field- and laboratory-based approaches to assess if influenza A viruses (IAVs) shed by ducks could remain viable for extended periods in surface water within three wetland complexes of North America. In a field experiment, replicate filtered surface water samples inoculated with duck swabs were tested for IAVs upon collection and again...
Authors
Andrew M. Ramey, Andrew B. Reeves, Judith Z. Drexler, Joshua T. Ackerman, Susan E.W. De La Cruz, Andrew S. Lang, Christina Leyson, Paul T. Link, Diann Prosser, Gregory J. Robertson, Jordan Wight, Sungsu Youk, Erica Spackman, Mary Pantin-Jackwood, Rebecca L. Poulson, David E. Stallknecht

Giant Gartersnakes (Thamnophis gigas) exploit abundant non-native prey while maintaining their appetite for native anurans Giant Gartersnakes (Thamnophis gigas) exploit abundant non-native prey while maintaining their appetite for native anurans

The introductions of nonnative species can cause great change in the trophic dynamics of native species. Giant Gartersnakes, endemic predators in the Central Valley of California, are listed as threatened because of the conversion of their once vast wetland habitat to agriculture. Further contributing to this snake's changing ecology is the introduction of many nonnative prey species...
Authors
Julia Ersan, Brian J. Halstead, Erica L Wildy, Michael L. Casazza, Glenn D. Wylie

Post-release survival of fallout Newell’s Shearwater fledglings from a rescue and rehabilitation program on Kauai, Hawaii Post-release survival of fallout Newell’s Shearwater fledglings from a rescue and rehabilitation program on Kauai, Hawaii

Light attraction impacts nocturnally active fledgling seabirds worldwide and is a particularly acute problem on Kaua‘i (the northern-most island in the main Hawaiian Island archipelago) for the Critically Endangered Newell’s shearwater Puffinus newelli. The Save Our Shearwaters (SOS) program was created in 1979 to address this issue and to date has recovered and released to sea more than...
Authors
Andre F. Raine, Tracy Anderson, Megan Vynne, Scott Driskill, Helen Raine, Josh Adams
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