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Publications

Below is a list of WERC's peer-reviewed publications. If you are searching for a specific publication and cannot find it in this list, please contact werc_web@usgs.gov

Filter Total Items: 3792

Field detection of avian influenza virus in wild birds: evaluation of a portable rRT-PCR system and freeze-dried reagents Field detection of avian influenza virus in wild birds: evaluation of a portable rRT-PCR system and freeze-dried reagents

Wild birds have been implicated in the spread of highly pathogenic avian influenza (HPAIV) of the H5N1 subtype, prompting surveillance along migratory flyways. Sampling of wild birds is often conducted in remote regions, but results are often delayed because of limited local analytical capabilities, difficulties with sample transportation and permitting, or problems keeping samples cold...
Authors
John Y. Takekawa, Samuel A. Iverson, Annie K. Schultz, Nichola J. Hill, Carol J. Cardona, Walter M. Boyce, Joseph P. Dudley

Guiding concepts for park and wilderness stewardship in an era of global environmental change Guiding concepts for park and wilderness stewardship in an era of global environmental change

The major challenge to stewardship of protected areas is to decide where, when, and how to intervene in physical and biological processes, to conserve what we value in these places. To make such decisions, planners and managers must articulate more clearly the purposes of parks, what is valued, and what needs to be sustained. A key aim for conservation today is the maintenance and...
Authors
Richard J. Hobbs, David N. Cole, Laurie Yung, Erika S. Zavaleta, Gregory H. Aplet, F. Stuart Chapin, Peter B. Landres, David J. Parsons, Nathan L. Stephenson, Peter S. White, David M. Graber, Eric S. Higgs, Constance I. Millar, John M. Randall, Kathy A. Tonnessen, Stephen Woodley

Demographic studies of Joshua trees in Mojave Desert National Parks: demography with emphasis on germination and recruitment Demographic studies of Joshua trees in Mojave Desert National Parks: demography with emphasis on germination and recruitment

The study of population change with regard to reproduction, seed dispersal, and germination, establishment, growth, and survival/mortality is known as demography. Demographic studies provide managers with information to assess future trends on the density, distribution, health, and population changes of importance or value, including Joshua trees (Yucca brevifolia). Demographic research...
Authors
T. C. Esque, B. Reynolds, L.A. DeFalco, B.A. Waitman

Decadal trends in marine reserves reveal differential rates of change in direct and indirect effects Decadal trends in marine reserves reveal differential rates of change in direct and indirect effects

Decadal-scale observations of marine reserves suggest that indirect effects on taxa that occur through cascading trophic interactions take longer to develop than direct effects on target species. Combining and analyzing a unique set of long-term time series of ecologic data in and out of fisheries closures from disparate regions, we found that the time to initial detection of direct...
Authors
R.C. Babcock, N.T. Shears, A.C. Alcala, N.S. Barrett, G.J. Edgar, K. D. Lafferty, T.R. McClanahan, G.R. Russ

Changes in the status of harvested rice fields in the Sacramento Valley, California: Implications for wintering waterfowl. Changes in the status of harvested rice fields in the Sacramento Valley, California: Implications for wintering waterfowl.

Harvested rice fields provide critical foraging habitat for wintering waterfowl in North America, but their value depends upon post-harvest treatments. We visited harvested ricefields in the Sacramento Valley, California, during the winters of 2007 and 2008 (recent period) and recorded their observed status as harvested (standing or mechanically modified stubble), burned, plowed, or...
Authors
Michael R. Miller, Jay D. Garr, Peter S. Coates

Lesions and behavior associated with forced copulation of juvenile Pacific harbor seals (Phoca vitulina richardsi) by southern sea otters (Enhydra lutris nereis) Lesions and behavior associated with forced copulation of juvenile Pacific harbor seals (Phoca vitulina richardsi) by southern sea otters (Enhydra lutris nereis)

Nineteen occurrences of interspecific sexual behavior between male southern sea otters (Enhydra lutris nereis) and juvenile Pacific harbor seals (Phoca vitulina richardsi) were reported in Monterey Bay, California, between 2000 and 2002. At least three different male sea otters were observed harassing, dragging, guarding, and copulating with harbor seals for up to 7 d postmortem...
Authors
Heather S. Harris, Stori C. Oates, Michelle M. Staedler, M. Tim Tinker, David A. Jessup, James T. Harvey, Melissa A. Miller

Bat guano virome: Predominance of dietary viruses from insects and plants plus novel mammalian viruses Bat guano virome: Predominance of dietary viruses from insects and plants plus novel mammalian viruses

Bats are hosts to a variety of viruses capable of zoonotic transmissions. Because of increased contact between bats, humans, and other animal species, the possibility exists for further cross-species transmissions and ensuing disease outbreaks. We describe here full and partial viral genomes identified using metagenomics in the guano of bats from California and Texas. A total of 34% and...
Authors
Linlin Li, G. Victoria Joseph, Chunlin Wang, Morris Jones, Gary M. Fellers, Thomas H. Kunz, Eric Delwart

Estimating aboveground biomass for broadleaf woody plants and young conifers in Sierra Nevada, California forests Estimating aboveground biomass for broadleaf woody plants and young conifers in Sierra Nevada, California forests

Quantification of biomass is fundamental to a wide range of research and natural resource management goals. An accurate estimation of plant biomass is essential to predict potential fire behavior, calculate carbon sequestration for global climate change research, assess critical wildlife habitat, and so forth. Reliable allometric equations from simple field measurements are necessary for...
Authors
Thomas W. McGinnis, Christine D. Shook, Jon E. Keeley

Colony attendance patterns by mated Forster's Terns Sterna forsteri using an automated data-logging receiver system Colony attendance patterns by mated Forster's Terns Sterna forsteri using an automated data-logging receiver system

In order to examine 24-hour colony attendance patterns by mated Forster's Terns Sterna forsteri in South San Francisco Bay, California, during incubation and chick-rearing stages, we radio-marked 10 individuals consisting of five pairs and recorded colony attendance using an automated data-logging receiver system. We calculated and analyzed five variables: the total attendance time by...
Authors
Jill D. Bluso-Demers, Joshua T. Ackerman, John Y. Takekawa

Factors influencing the at-sea distribution of Cassin's Auklets (Ptychoramphus aleuticus) that breed in the Channel Islands, California Factors influencing the at-sea distribution of Cassin's Auklets (Ptychoramphus aleuticus) that breed in the Channel Islands, California

We used radiotelemetry to evaluate at-sea habitat use by Cassin's Auklets (Ptychoramphus aleuticus) that bred at Prince Island, off southern California, from 1999 through 2001. We used logistic regression to compare paired radiotelemetry (presence) with random (pseudo-absence) location-associated habitat variables derived from (1) satellite remote-sensing of sea surface temperature and...
Authors
Josh Adams, John Y. Takekawa, Harry R. Carter, Julie L. Yee

Climatic water deficit, tree species ranges, and climate change in Yosemite National Park Climatic water deficit, tree species ranges, and climate change in Yosemite National Park

Aim  (1) To calculate annual potential evapotranspiration (PET), actual evapotranspiration (AET) and climatic water deficit (Deficit) with high spatial resolution; (2) to describe distributions for 17 tree species over a 2300-m elevation gradient in a 3000-km2 landscape relative to AET and Deficit; (3) to examine changes in AET and Deficit between past (c. 1700), present (1971–2000) and...
Authors
James A. Lutz, Jan W. Van Wagtendonk, Jerry F. Franklin

Fishing out marine parasites? Impacts of fishing on rates of parasitism in the ocean Fishing out marine parasites? Impacts of fishing on rates of parasitism in the ocean

Among anthropogenic effects on the ocean, fishing is one of the most pervasive and extends deepest into the past. Because fishing reduces the density of fish (reducing transmission efficiency of directly transmitted parasites), selectively removes large fish (which tend to carry more parasites than small fish), and reduces food web complexity (reducing transmission efficiency of...
Authors
Chelsea L. Wood, Kevin D. Lafferty, Fiorenza Micheli
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