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Publications

Below is a list of WERC's peer-reviewed publications. If you are searching for a specific publication and cannot find it in this list, please contact werc_web@usgs.gov

Filter Total Items: 3723

California sea otter (Enhydra lutris nereis) census results, Spring 2017 California sea otter (Enhydra lutris nereis) census results, Spring 2017

The 2017 census of southern sea otters (Enhydra lutris nereis) was conducted between late April and early July along the mainland coast of central California and in April at San Nicolas Island in southern California. The 3-year average of combined counts from the mainland range and San Nicolas Island was 3,186, down by 86 sea otters from the previous year. This is the second year that...
Authors
M. Tim Tinker, Brian B. Hatfield

Distribution and abundance of Least Bell’s Vireos (Vireo bellii pusillus) and Southwestern Willow Flycatchers (Empidonax traillii extimus) on the Middle San Luis Rey River, San Diego, southern California—2016 data summary Distribution and abundance of Least Bell’s Vireos (Vireo bellii pusillus) and Southwestern Willow Flycatchers (Empidonax traillii extimus) on the Middle San Luis Rey River, San Diego, southern California—2016 data summary

Executive Summary We surveyed for Least Bell’s Vireos (LBVI) (Vireo bellii pusillus) and Southwestern Willow Flycatchers (SWFL) (Empidonax traillii extimus) along the San Luis Rey River, between College Boulevard in Oceanside and Interstate 15 in Fallbrook, California (middle San Luis Rey River), in 2016. Surveys were done from March 30 to July 11 (LBVI) and from May 18 to July 30 (SWFL)...
Authors
Lisa D. Allen, Scarlett L. Howell, Barbara E. Kus

An evaluation of the efficacy of using environmental DNA (eDNA) to detect giant gartersnakes (Thamnophis gigas) An evaluation of the efficacy of using environmental DNA (eDNA) to detect giant gartersnakes (Thamnophis gigas)

Detecting populations of rare or cryptic species is essential for their conservation. For species like giant gartersnakes (Thamnophis gigas), conventional survey methods can be expensive and inefficient. These sampling difficulties might be overcome by modern techniques that detect deoxyribonucleic acid (DNA) shed by organisms into the environment (eDNA). We evaluated the efficacy of...
Authors
Brian J. Halstead, Dustin A. Wood, Lizabeth Bowen, Shannon C. Waters-Dynes, Amy G. Vandergast, Julia S. Ersan, Shannon M. Skalos, Michael L. Casazza

Ancient lakes, Pleistocene climates and river avulsions structure the phylogeography of a large but little-known rock scorpion from the Mojave and Sonoran deserts Ancient lakes, Pleistocene climates and river avulsions structure the phylogeography of a large but little-known rock scorpion from the Mojave and Sonoran deserts

Recent syntheses of phylogeographical data from terrestrial animals in the Mojave and Sonoran deserts have revealed a complex history of geologic and climatic vicariance events. We studied the phylogeography of Smeringurus vachoni to see how vicariance events may have impacted a large, endemic rock scorpion. Additionally, we used the phylogeographical data to examine the validity of two...
Authors
Matthew R. Graham, Dustin A. Wood, Jonathan A. Henault, Zachary J. Valois, Paula E. Cushing

Facultative parasitism by the bivalve Kurtiella pedroana in the sand crab Emerita analoga Facultative parasitism by the bivalve Kurtiella pedroana in the sand crab Emerita analoga

It is rare that an organism capable of independent or commensalistic existence can also become endoparasitic on a host. In this study, we documented a potential step toward parasitism in the commensal clam Kurtiella pedroana (Bivalvia: Galeommatoidea). Galeommatoideans are known commensals of various invertebrates, including crustaceans. Emerita analoga (Decapoda: Hippidae) is an...
Authors
Ritin Bhaduri, Paul Valentich-Scott, Mark Hilgers, Rajvir Singh, Mikaila Hickman, Kevin D. Lafferty

What mediates tree mortality during drought in the southern Sierra Nevada? What mediates tree mortality during drought in the southern Sierra Nevada?

Severe drought has the potential to cause selective mortality within a forest, thereby inducing shifts in forest species composition. The southern Sierra Nevada foothills and mountains of California have experienced extensive forest dieback due to drought stress and insect outbreak. We used high-fidelity imaging spectroscopy (HiFIS) and light detection and ranging (LiDAR) from the...
Authors
Tarin Paz-Kagan, Philip Brodrick, Nicholas R. Vaughn, Adrian J. Das, Nathan L. Stephenson, Koren R. Nydick, Gregory P. Asner

Food abundance, prey morphology, and diet specialization influence individual sea otter tool use Food abundance, prey morphology, and diet specialization influence individual sea otter tool use

Sea otters are well-known tool users, employing objects such as rocks or shells to break open invertebrate prey. We used a series of generalized linear mixed effect models to examine observational data on prey capture and tool use from 211 tagged individuals from 5 geographically defined study areas throughout the sea otter’s range in California. Our best supported model was able to...
Authors
Jessica A. Fujii, Katherine Ralls, M. Tim Tinker

Wildlife on the Nevada National Security Site Wildlife on the Nevada National Security Site

Mountain lions, desert bighorn sheep, mule deer, and a variety of other wildlife live on and pass through the Nevada National Security Site each day. It is a highly restricted area that is free of hunting and has surprisingly pristine areas. This 22-minute program highlights an extraordinary study on how mountain lions interact with their prey. It shows how the scientists use helicopters...
Authors
Kathleen M. Longshore, Stephen M. Wessells

Comparing automated classification and digitization approaches to detect change in eelgrass bed extent during restoration of a large river delta Comparing automated classification and digitization approaches to detect change in eelgrass bed extent during restoration of a large river delta

Native eelgrass (Zostera marina) is an important contributor to ecosystem services that supplies cover for juvenile fish, supports a variety of invertebrate prey resources for fish and waterbirds, provides substrate for herring roe consumed by numerous fish and birds, helps stabilize sediment, and sequesters organic carbon. Seagrasses are in decline globally, and monitoring changes in...
Authors
Anna Elizabeth Davenport, Jerry D. Davis, Isa Woo, Eric E. Grossman, Jesse B. Barham, Christopher S. Ellings, John Y. Takekawa

Gene transcription patterns in response to low level petroleum contaminants in Mytilus trossulus from field sites and harbors in southcentral Alaska Gene transcription patterns in response to low level petroleum contaminants in Mytilus trossulus from field sites and harbors in southcentral Alaska

The 1989 Exxon Valdez oil spill damaged a wide range of natural resources, including intertidal communities, and post-spill studies demonstrated acute and chronic exposure and injury to an array of species. Standard toxicological methods to evaluate petroleum contaminants have assessed tissue burdens, with fewer assays providing indicators of health or physiology, particularly when...
Authors
Lizabeth Bowen, A. Keith Miles, Brenda E. Ballachey, Shannon C. Waters-Dynes, James L. Bodkin, Mandy Lindeberg, Daniel Esler

Occurrence of amphibians in northern California coastal dune drainages Occurrence of amphibians in northern California coastal dune drainages

Many coastal dune ecosystems have been degraded by non-native dune vegetation, but these systems might still provide valuable habitat for some taxa, including amphibians. Because restoration of degraded dune systems is occurring and likely to continue, we examined the occurrence of amphibians in drainages associated with a coastal dune ecosystem degraded by invasive plants (European...
Authors
Brian J. Halstead, Patrick M. Kleeman

Mass mortality attributed to acanthocephaliasis at a Gull-billed Tern (Gelochelidon nilotica) colony in coastal California Mass mortality attributed to acanthocephaliasis at a Gull-billed Tern (Gelochelidon nilotica) colony in coastal California

From 12 May 2013 to 29 May 2013, the Gull-billed Tern (Gelochelidon nilotica) colony at the San Diego Bay National Wildlife Refuge, California, experienced a mass die-off of at least 92 adults, representing 71–92% of the breeding population on the US west coast. Cause of death was determined to be peritonitis due to perforations of the intestine by a large quantity of acanthocephala...
Authors
Robert T. Patton, Katharine S. Goodenough, Susan De La Cruz, HannahRose M. Nevins, Rebecca A. Cole, Barbara L. Bodenstein, Valerie I. Shearn-Bochsler, Brian Collins, Jessie Beck, Matthew Sadowski, John Y. Takekawa
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