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Publications

Below is a list of WERC's peer-reviewed publications. If you are searching for a specific publication and cannot find it in this list, please contact werc_web@usgs.gov

Filter Total Items: 3708

Host contact and shedding patterns clarify variation in pathogen exposure and transmission in threatened tortoise Gopherus agassizii: implications for disease modelling and management Host contact and shedding patterns clarify variation in pathogen exposure and transmission in threatened tortoise Gopherus agassizii: implications for disease modelling and management

Summary Most directly transmitted infections require some form of close contact between infectious and susceptible hosts to spread. Often disease models assume contacts are equal and use mean field estimates of transmission probability for all interactions with infectious hosts. Such methods may inaccurately describe transmission when interactions differ substantially in their ability to...
Authors
Christina M. Aiello, Kenneth E. Nussear, Todd C. Esque, Patrick G. Emblidge, Pratha Sah, Shweta Bansal, Peter J. Hudson

The high cost of motherhood: End-lactation syndrome in southern sea otters (Enhydra lutris nereis) on the central California, USA, coast The high cost of motherhood: End-lactation syndrome in southern sea otters (Enhydra lutris nereis) on the central California, USA, coast

Sea otters (Enhydra lutris) have exceptionally high energetic requirements, which nearly double during lactation and pup care. Thus, females are extremely vulnerable to caloric insufficiency. Despite a number of compensatory strategies, the metabolic challenge of reproduction culminates in numerous maternal deaths annually. Massive depletion of energy reserves results in a case...
Authors
Sarah S Chinn, Melissa A. Miller, M. Tim Tinker, Michelle M. Staedler, Francesca I. Batac, Erin M. Dodd, Laird A. Henkel

Differentiating sex and species of Western Grebes (Aechmophorus occidentalis) and Clark's Grebes (Aechmophorus clarkii) and their eggs using external morphometrics and discriminant function analysis Differentiating sex and species of Western Grebes (Aechmophorus occidentalis) and Clark's Grebes (Aechmophorus clarkii) and their eggs using external morphometrics and discriminant function analysis

In birds where males and females are similar in size and plumage, sex determination by alternative means is necessary. Discriminant function analysis based on external morphometrics was used to distinguish males from females in two closely related species: Western Grebe (Aechmophorus occidentalis) and Clark's Grebe (A. clarkii). Additionally, discriminant function analysis was used to...
Authors
C. Alex Hartman, Joshua T. Ackerman, Collin A. Eagles-Smith, Mark P. Herzog

Conditional vulnerability of plant diversity to atmospheric nitrogen deposition across the United States Conditional vulnerability of plant diversity to atmospheric nitrogen deposition across the United States

Atmospheric nitrogen (N) deposition has been shown to decrease plant species richness along regional deposition gradients in Europe and in experimental manipulations. However, the general response of species richness to N deposition across different vegetation types, soil conditions, and climates remains largely unknown even though responses may be contingent on these environmental...
Authors
Samuel M. Simkin, Edith B. Allen, William D. Bowman, Christopher L. Clark, Jayne Belnap, Matthew L. Brooks, Brian S. Cade, Scott L. Collins, Linda H. Geiser, Frank S. Gilliam, Sarah E. Jovan, Linda H. Pardo, Bethany K. Schulz, Carly J. Stevens, Katharine N. Suding, Heather L. Throop, Donald M. Waller

Evaluation of Caspian tern (Hydroprogne caspia) and snowy plover (Charadrius alexandrinus nivosus) nesting on modified islands at the Don Edwards San Francisco Bay National Wildlife Refuge, California—2015 Annual Report Evaluation of Caspian tern (Hydroprogne caspia) and snowy plover (Charadrius alexandrinus nivosus) nesting on modified islands at the Don Edwards San Francisco Bay National Wildlife Refuge, California—2015 Annual Report

Executive Summary In order to address the 2008/10 NOAA Fisheries Biological Opinion for operation of the Federal Columbia River Power System, the U.S. Army Corps of Engineers (USACE) and the Bureau of Reclamation (Reclamation) have developed and begun implementation of Caspian tern (Hydroprogne caspia) management plans. This implementation includes relocating nesting Caspian terns out of...
Authors
C. Alex Hartman, Joshua T. Ackerman, Mark P. Herzog, Cheryl Strong, David Trachtenbarg, Kimberley A. Sawyer, Crystal A. Shore

Nest survival is influenced by parental behaviour and heterospecifics in a mixed-species colony Nest survival is influenced by parental behaviour and heterospecifics in a mixed-species colony

Studies of avian nest success often focus on examining influences of variation in environmental and seasonal factors. However, in-depth evaluations can also incorporate variation in individual incubation behaviour to further advance our understanding of avian reproductive ecology. We examined these relationships in colonially nesting Black-crowned Night-Herons Nycticorax nycticorax using...
Authors
Brianne E. Brussee, Peter S. Coates, Roger L. Hothem, Kristy Howe, Michael L. Casazza, John M. Eadie

Enhancing and restoring habitat for the desert tortoise Enhancing and restoring habitat for the desert tortoise

Habitat has changed unfavorably during the past 150 y for the desert tortoise Gopherus agassizii, a federally threatened species with declining populations in the Mojave Desert and western Sonoran Desert. To support recovery efforts, we synthesized published information on relationships of desert tortoises with three habitat features (cover sites, forage, and soil) and candidate...
Authors
Scott R. Abella, Kristin H. Berry

Permissible Home Range Estimation (PHRE) in restricted habitats: A new algorithm and an evaluation for sea otters Permissible Home Range Estimation (PHRE) in restricted habitats: A new algorithm and an evaluation for sea otters

Parametric and nonparametric kernel methods dominate studies of animal home ranges and space use. Most existing methods are unable to incorporate information about the underlying physical environment, leading to poor performance in excluding areas that are not used. Using radio-telemetry data from sea otters, we developed and evaluated a new algorithm for estimating home ranges...
Authors
Lily M Tarjan, M. Tim Tinker

Non-invasive genetic sampling of Southern Mule Deer (Odocoileus hemionus fuliginatus) reveals limited movement across California State Route 67 in San Diego County Non-invasive genetic sampling of Southern Mule Deer (Odocoileus hemionus fuliginatus) reveals limited movement across California State Route 67 in San Diego County

—The Southern Mule Deer is a mobile but non-migratory large mammal found throughout southern California and is a covered species in the San Diego Multi-Species Conservation Plan. We assessed deer movement and population connectivity across California State Route 67 and two smaller roads in eastern San Diego County using non-invasive genetic sampling. We collected deer scat pellets...
Authors
Anna Mitelberg, Amy G. Vandergast

Spatial and temporal patterns of cloud cover and fog inundation in coastal California: Ecological implications Spatial and temporal patterns of cloud cover and fog inundation in coastal California: Ecological implications

The presence of low-lying stratocumulus clouds and fog has been known to modify biophysical and ecological properties in coastal California where forests are frequently shaded by low-lying clouds or immersed in fog during otherwise warm and dry summer months. Summer fog and stratus can ameliorate summer drought stress and enhance soil water budgets, and often have different spatial and...
Authors
Bharat Rastogi, A. Park Williams, Douglas T. Fischer, Sam F. Iacobellis, Kathryn McEachern, Leila Carvalho, Charles Leslie Jones, Sara A. Baguskas, Christopher J. Still

Complementary approaches to diagnosing marine diseases: a union of the modern and the classic Complementary approaches to diagnosing marine diseases: a union of the modern and the classic

Linking marine epizootics to a specific aetiology is notoriously difficult. Recent diagnostic successes show that marine disease diagnosis requires both modern, cutting-edge technology (e.g. metagenomics, quantitative real-time PCR) and more classic methods (e.g. transect surveys, histopathology and cell culture). Here, we discuss how this combination of traditional and modern approaches...
Authors
Colleen A. Burge, Carolyn S. Friedman, Rodman G. Getchell, Marcia House, Kevin D. Lafferty, Laura D. Mydlarz, Katherine C. Prager, Kathryn P. Sutherland, Tristan Renault, Ikunari Kiryu, Rebecca Vega-Thurber

Ecology, distribution, and predictive occurrence modeling of Palmers chipmunk (Tamias palmeri): a high-elevation small mammal endemic to the Spring Mountains in southern Nevada, USA Ecology, distribution, and predictive occurrence modeling of Palmers chipmunk (Tamias palmeri): a high-elevation small mammal endemic to the Spring Mountains in southern Nevada, USA

Although montane sky islands surrounded by desert scrub and shrub steppe comprise a large part of the biological diversity of the Basin and Range Province of southwestern North America, comprehensive ecological and population demographic studies for high-elevation small mammals within these areas are rare. Here, we examine the ecology and population parameters of the Palmer’s chipmunk...
Authors
Chris E. Lowrey, Kathleen M. Longshore, Brett R. Riddle, Stacy Mantooth
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