Publications

Concerns about infectious diseases in fish used for research have risen along with the dramatic increase in the use of fish as models in biomedical research. In addition to acute diseases causing severe morbidity and mortality, underlying chronic conditions that cause low-grade or subclinical infections may confound research results. Here we present recommendations and strategies to...

We examined invertebrate prey, fish diet, and energy assimilation in relation to habitat variation for steelhead Oncorhynchus mykiss (anadromous rainbow trout) and rainbow trout in nine low-order tributaries of the South Fork Trinity River, northern California. These streams spanned a range of environmental conditions, which allowed us to use bioenergetics modeling to determine the...

We conducted a radiotelemetry evaluation to determine if strobe lights could be used to decrease turbine entrainment of juvenile steelhead (Oncorhynchus mykiss) at Cowlitz Falls Dam, Washington. We found that radio-tagged juvenile steelhead approached and entered two spillbays (one lighted, one unlighted) in equal proportions. However, the presence of strobe lights was associated with...

We investigated the evolutionary relationships among five sympatric morphs of Dolly Varden Salvelinus malma (white, Schmidti, longhead, river, and dwarf) inhabiting landlocked Kronotsky Lake on the Kamchatka Peninsula, Russia, and an anadromous population below the barrier waterfall on the outflowing Kronotsky River. Morphological analyses indicated phenotypic differentiation...

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Concerns over the potential effects of in-water placement of dredged materials prompted us to develop a GIS-based model that characterizes in a spatially explicit manner white sturgeon Acipenser transmontanus rearing habitat in the lower Columbia River, USA. The spatial model was developed using water depth, riverbed slope and roughness, fish positions collected in 2002, and Mahalanobis...

To estimate the Mt. Graham red squirrel (MGRS) population, personnel visit a proportion of middens each year to determine their occupancy (Snow in this vol.). The method results in very tight confidence intervals (high precision), but the accuracy of the population estimate is dependent upon knowing where all the middens are located. I hypothesized that there might be areas outside the...

During 2006, we used acoustic telemetry and a route-specific survival model (RSSM, Skalski et al. 2002) to estimate behavior, passage, and survival of juvenile salmonids during two different spill operations and diel periods at McNary Dam. An evaluation of 12-h versus 24-h spill was proposed for the spring migration period at McNary Dam. However, high river discharge did not allow for...

This report describes a study of survival and migration behavior of juvenile coho salmon in the Klamath River relative to discharge at Iron Gate Dam in 2006. This was the second year of a multi-year study with the goal of determining the effects of discharge at Iron Gate Dam on survival of juvenile coho salmon downstream. The study was a collaborative effort among U.S. Geological Survey...

In vitro viability of Ichthyophonus spp. spores in seawater and freshwater corresponded with the water type of the host from which the spores were isolated. Among Ichthyophonus spp. spores from both marine and freshwater fish hosts (Pacific herring, Clupea pallasii, and rainbow trout, Oncorhynchus mykiss, respectively), viability was significantly greater (P 0.05) after incubation in...

This report summarizes findings from the third year of a 4-year-long field investigation to document selected baseline environmental conditions in 29 agricultural drains and ponds operated by the Imperial Irrigation District along the southern border of the Salton Sea. Routine water quality and fish species were measured at roughly quarterly intervals from April 2007 to January 2008. The...

Researchers at the USGS Western Fisheries Research Center's Columbia River Research Laboratory, working with the U.S. Army Corps of Engineers, sought to better understand upstream and downstream passage of white sturgeon at dams. A study at The Dalles Dam provided the opportunity to compare two fish ladders; one that passes sturgeon upstream to one that does not, to determine if subtle...