Publications
USGS divers in the Elwha River
WFRC zebrafish laboratory
Processing a Lost River sucker
Below is a list of available WFRC peer reviewed and published science.
Filter Total Items: 2559
DRIFteRS: A dataset of drift invertebrate densities in streams and rivers across western North America, 1997–2024 DRIFteRS: A dataset of drift invertebrate densities in streams and rivers across western North America, 1997–2024
Prey availability is among the most influential and highly variable determinants of fish growth and freshwater habitat carrying capacity, yet it remains understudied compared to physical habitat variables (Ouellet et al., 2025; Rosenfeld et al., 2014; Weber et al., 2017). We often lack a clear understanding of how much food is available to fishes, how it varies spatially and temporally...
Authors
Elsa K. Toskey, Toshio Matsuoka, Peter M. Kiffney, Sean M. Naman, Martin C. Liermann, Javan Bailey, David Beauchamp, J. Ryan Bellmore, Christopher A. Binckley, Steven C. Blumenshine, Timothy J. Caldwell, Michael P. Carey, Shannon Claeson, Chelsea Clawson, Rosa Cox, Cromwell. Kara J., Robert J. Danehy, Michael J. Dodrill, Jeffrey J. Duda, Jason B. Fellman, Adrianne Z. Grimm, Tyson B. Hallbert, Chris E. Jordan, Ernest R. Keeley, Brian P. Kennedy, Theodore Kennedy, Andre E. Kohler, Erin D. Lowery, Kate H Macneale, Kyle D. Martens, Sarah A. Morley, Jeffrey Muehlbauer, Jason B. Neuswanger, Alison O'Dowd, Shelley Pneh, Mary E. Power, Suzanne J. Rhoades, Jordan Rosenfeld, Gabriel Rossi, Beth L. Sanderson, Katy K. Shelby, Thomas Starky-Owens, Jamie N. Thompson, Carol Volk, Jasmine S. Williamshen, Robert W. Wisseman
Estimating habitat availability for Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) to inform reintroduction planning in the middle Snake River basin, USA Estimating habitat availability for Chinook salmon (Oncorhynchus tshawytscha) and steelhead (O. mykiss) to inform reintroduction planning in the middle Snake River basin, USA
Anadromous fishes have been blocked from the middle Snake River basin since the construction of flood control, irrigation, and hydroelectric projects during the 19th and 20th centuries, culminating with the construction of Hells Canyon Dam (river kilometer [rkm] 398) in 1967. Seven large watersheds in the blocked area of the basin are under consideration for Pacific salmon reintroduction...
Authors
Jim Hatten, Jill Hardiman, Dennis Daw, Claire E. Couch, Tobias J. Kock
Biomarkers of mortality risks in Yukon Chinook salmon Biomarkers of mortality risks in Yukon Chinook salmon
Premature mortality of spawning adult Pacific salmon (Oncorhynchus species) can strongly influence population dynamics and complicate escapement-based management. Heat stress and Ichthyophonus infections have been identified as probable drivers of premature mortality in Yukon River Chinook salmon (Oncorhynchus tshawytscha) and likely contributors to low spawning abundance. We leveraged a
Authors
Vanessa R. von Biela, Lizabeth Bowen, Amy M. Regish, Jayde A Ferguson, Zachary W Liller, Stephen D. McCormick, Paul Hershberger, Stan Zuray, Morag Clinton, Michael P. Carey
Navigating uncertainty and competing objectives: Spring chinook salmon recovery in the upper Willamette river Navigating uncertainty and competing objectives: Spring chinook salmon recovery in the upper Willamette river
Globally, anadromous fish populations are threatened with extinction due to multiple factors, including river impoundments that block migration, widespread alteration of physical habitat, temperature, and flow regimes, commercial and recreational harvest, changes in biological communities, and long-term climate trends. In this synthesis, we describe how physical and biological factors...
Authors
Claire E. Couch, J. Rose Wallick, James T. Peterson, Bailey August Morgan, Matthew L. Keefer, Christopher C. Caudill, Kathleen G. O’Malley, Christina Amy Murphy, James S. White, Jake R. Kelley, Dalton J. Hance, Gabriel S. Hansen, Tobias J. Kock
Using a temporary emigration model to estimate abundance of stream fishes from hybrid removal surveys with and without block nets Using a temporary emigration model to estimate abundance of stream fishes from hybrid removal surveys with and without block nets
Monitoring programs are often faced with a decision to allocate resources into either robust spatiotemporal coverage to estimate a population index (e.g., not true abundance) or confirming closed sampling conditions (e.g., with block nets) for an unbiased population estimate at the cost of spatiotemporal coverage. However, making accurate and precise abundance estimates at robust...
Authors
Brock M. Huntsman, Russell Perry, Kai Palenscar, Brett Mills, Kerwin Russell, Marissa L. Wulff, Heather Dyer, Russell Barabe
Increasing artificial light at night enhances salmonid predator foraging efficiency in an urbanized lake Increasing artificial light at night enhances salmonid predator foraging efficiency in an urbanized lake
Artificial light at night (ALAN) poses a threat to ecosystems globally. It includes both direct and indirect light, or skyglow, which occurs when ALAN scatters in the atmosphere, extending beyond its original source. We analyzed ALAN trends in Lake Washington, WA, from 2014 to 2023 using Visible Infrared Imaging Radiometer Suite (VIIRS) nighttime light measurements, evaluated the...
Authors
Jennifer A Schulien, Tessa Julianne Code
Biological, environmental, and geomorphological factors influencing reach-specific survival of spring Chinook Salmon smolts upstream of the Columbia–Snake River hydrosystem Biological, environmental, and geomorphological factors influencing reach-specific survival of spring Chinook Salmon smolts upstream of the Columbia–Snake River hydrosystem
Objective Pacific salmon Oncorhynchus spp. are exhibiting catastrophic declines throughout much of the Pacific Northwest, and juvenile mortality contributions are disproportionately high. Many Pacific salmon smolt populations are exhibiting high natal stream mortality; however, detailed natal stream reach-specific survival knowledge is lacking. Our objectives were to estimate natal...
Authors
Scott D. Favrot, Russell W. Perry, Sean W. Kimbrel
Seasonal trophic dynamics drive growth potential and predation risk for reintroduced Chinook salmon in Shasta Reservoir Seasonal trophic dynamics drive growth potential and predation risk for reintroduced Chinook salmon in Shasta Reservoir
Reservoir ecosystems can significantly affect anadromous salmon populations reintroduced upstream of impassable high-head dams. In this study, we examine how a novel reservoir food web created by an impoundment can limit juvenile growth or survival through the seasonal production or access to food, promote competition for available resources, and affect risk of the food supply or...
Authors
Rachelle Carina Johnson, Claire E. Couch, Rebecca E. Barsky, Candice R. Powers, Chloe E. Pak, Karl D. Stenberg, Jessica O. Diallo, Kimberly A. Larsen, Marshal S. Hoy, David A. Beauchamp, Tobias J. Kock
Restoration is a partial but not complete solution for long-term declines in oyster populations—A case history from the northeastern Gulf of America Restoration is a partial but not complete solution for long-term declines in oyster populations—A case history from the northeastern Gulf of America
Objective We sought to evaluate whether oyster reef restoration is associated with sustained increases in intertidal eastern oyster Crassostrea virginica density in Suwannee Sound, Florida, and to examine how commercial fishing activity and freshwater discharge may modify those patterns.Methods We monitored intertidal oyster reefs for 14 years, including 9 years prior to large-scale...
Authors
W. E. Pine, J. F. Moore, Michael J. Dodrill, J. Aufmuth, M. Moreno, T. S. Coleman, J. Casteel, S. Beck, B. Ennis, N. Rogers, P. C Frederick
Wind River subbasin restoration: Annual report of U.S. Geological Survey activities January 2024 through December 2024 Wind River subbasin restoration: Annual report of U.S. Geological Survey activities January 2024 through December 2024
We sampled juvenile wild Oncorhynchus mykiss (Steelhead Trout) in headwater streams of the Wind River, Washington, to characterize population attributes and investigate life-history metrics, particularly migratory patterns, and early life-stage survival. Additionally, this sampling provides an index of abundance of non-native Brook Trout Salvelinus confluentus. We used passive integrated...
Authors
Ian Jezorek
Distributions of host heterogeneity in susceptibility show signatures of pathogen geographic structure in an insect baculovirus Distributions of host heterogeneity in susceptibility show signatures of pathogen geographic structure in an insect baculovirus
Segregated variation between populations is a fundamental evolutionary process leading to parasite specialization, yet the resulting impacts on infection heterogeneity within populations are theoretically and empirically understudied. We asked whether the distribution of host susceptibility to infection within populations carries the signatures of geographic structure from pathogen local
Authors
Arietta E. Fleming-Davies, Savannah S. Shields, Jacob Fletcher, Wilnelia Recart, David James Páez
Disease-associated mortality drives reduction in Yukon River Chinook salmon escapement: A novel method for quantifying the negative impacts of ‘misfit’ parasites to improve fisheries management Disease-associated mortality drives reduction in Yukon River Chinook salmon escapement: A novel method for quantifying the negative impacts of ‘misfit’ parasites to improve fisheries management
Parasites can suppress host populations through parasite-induced mortality. However, the negative effects of parasites are difficult to measure in wild populations and we have few tools for quantifying the magnitude of parasite-induced mortality. This is especially true for many ‘misfit’ parasites that do not fit into standard classifications (e.g. fungal-like parasites and myxozoans)...
Authors
Mark Q. Wilber, Jayde A. Ferguson, David James Páez, Zachary W. Liller