Geophysical properties (P-wave velocity, gamma ray density, and magnetic susceptibility), geochronologic (radiocarbon, excess Lead-210, and Cesium-137), and geochemical data (organic carbon content and 60 element contents) are reported for select vibracores collected aboard the S/V Retriever October 17-20, 2016 in San Pablo Bay, California. Geophysical properties were measured with a Geotek Multi-Sensor Core Logger (MSCL). Radiocarbon was measured by accelerator mass spectrometry (AMS). Excess Lead-210 and Cesium-137 activities were measured by gamma-ray counting in a high purity, low background germanium well detector (HPGe). Total organic carbon was measured in bulk sediment. Element contents were determined on the less than 0.063 mm (fine) size fraction of sediment by inductively coupled plasma mass spectrometry (ICP-MS).