Single Nucleotide Polymorphism (SNP) genomic data of moose (Alces alces) from the contiguous United States, 2009-2017
April 13, 2022
We analyzed the single nucleotide polymorphisms (SNPs) present in the genomes of moose representing 3 subspecies in the contiguous United States. Blood samples were collected opportunistically from collaborators during field efforts or were supplied to our lab from collaborators' archives, and represented moose sampling occurring between 2009-2017. DNA was extracted, sequenced using next generation sequencing, and SNPs analyzed using the genetics programs Structure and Tess3, and by performing basic population statistics. These analyses were used to determine the population structure of moose at the subspecies level.
Citation Information
| Publication Year | 2022 |
|---|---|
| Title | Single Nucleotide Polymorphism (SNP) genomic data of moose (Alces alces) from the contiguous United States, 2009-2017 |
| DOI | 10.5066/P9FXUZN8 |
| Authors | Jason A Ferrante, Chase H. Smith, Laura M Thompson, Margaret (Maggie) E. Hunter |
| Product Type | Data Release |
| Record Source | USGS Asset Identifier Service (AIS) |
| USGS Organization | Wetland and Aquatic Research Center - Gainesville, FL |
| Rights | This work is marked with CC0 1.0 Universal |
Related
Genome-wide SNP analysis of three moose subspecies at the southern range limit in the contiguous United States
Genome-wide evaluations of genetic diversity and population structure are important for informing management and conservation of trailing-edge populations. North American moose (Alces alces) are declining along portions of the southern edge of their range due to disease, species interactions, and marginal habitat, all of which may be exacerbated by climate change. We employed a genotyping by seque
Authors
Jason Ferrante, Chase H. Smith, Laura Thompson, Margaret Hunter
Related
Genome-wide SNP analysis of three moose subspecies at the southern range limit in the contiguous United States
Genome-wide evaluations of genetic diversity and population structure are important for informing management and conservation of trailing-edge populations. North American moose (Alces alces) are declining along portions of the southern edge of their range due to disease, species interactions, and marginal habitat, all of which may be exacerbated by climate change. We employed a genotyping by seque
Authors
Jason Ferrante, Chase H. Smith, Laura Thompson, Margaret Hunter