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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5026

The story of the Penobscot River Ecology Mural: A 10-step process for scientists to create public art The story of the Penobscot River Ecology Mural: A 10-step process for scientists to create public art

Rivers are home to a wide variety of biota, including fishes, amphibians, reptiles, birds, freshwater mussels, aquatic insects, and microscopic organisms that fill unique niches to support broader ecosystem functions. While the general public may be aware of recreationally relevant biological life (e.g., fishes and insects to model flyfishing flies from), they may not be aware of more...
Authors
Jillian Fedarick, Christina Amy Murphy, Sydne Record, Allison H. Roy, Annette Dodd, Susan L. Smith

Assessing American eel (Anguilla rostrata) distribution in a heavily dammed watershed using eDNA : The Penobscot River watershed, Maine, USA Assessing American eel (Anguilla rostrata) distribution in a heavily dammed watershed using eDNA : The Penobscot River watershed, Maine, USA

Catadromous American eel ( Anguilla rostrata ) are native to Maine's Penobscot River watershed and historically have migrated through many of its tributaries prior to extensive damming. Recent restoration efforts, including dam removals, have improved connectivity in the lower reaches of the Penobscot River. Characterizing the extent of the American eel's distribution is important to...
Authors
Shawn Snyder, Cody Dillingham, Lara S. Katz, Michael T. Kinnison, Joseph D. Zydlewski

Multi-scale habitat characteristics influence Paleback Darter occupancy and detection probability Multi-scale habitat characteristics influence Paleback Darter occupancy and detection probability

Objective The limited distribution of the Paleback Darter Etheostoma pallididorsum, which is often associated with dynamic headwater streams, makes the species vulnerable to changes in its environment in west-central Arkansas. A detailed understanding of habitat characteristics that support the species at multiple spatial scales is limited. This project assessed the relative influences...
Authors
Maxwell L. Hartman, Katie M. Morris, Jonathan J. Spurgeon, Steve E. Lochmann

Spatially explicit power analyses to inform occupancy‐based multi‐species wildlife monitoring programmes Spatially explicit power analyses to inform occupancy‐based multi‐species wildlife monitoring programmes

1. Current and accurate information on wildlife populations is integral to successful biodiversity management and conservation globally. Nevertheless, many monitoring programs fail in their attempts to accurately monitor populations of interest due to interlinked issues including insufficient sample sizes, inappropriate duration, lack of reproducibility, and lack of clearly stated...
Authors
Joshua P. Twining, Angela K. Fuller

anadrofish: Anadromous fish population responses to dams anadrofish: Anadromous fish population responses to dams

Diadromous fishes world-wide experienced precipitous declines during the 19th and 20th centuries due to a combination of overfishing, pollution, and freshwater habitat loss through construction of dams (Limburg & Waldman, 2009). Following wide-spread fishing closures and large-scale remediation of many historical pollution sources, dams in coastal rivers remain as the largest tractable...
Authors
Daniel S. Stich, Joshua D. Hardesty, Nicholas T. Jordan, Samuel G. Roy, Timothy F. Sheehan, Shawn D. Snyder, Joseph D. Zydlewski

Salting behaviors influence urban stream conductivity in Boston, Massachusetts (USA) Salting behaviors influence urban stream conductivity in Boston, Massachusetts (USA)

Freshwater salinization is a major concern in temperate climates where road salt is used as a deicer to manage snow and ice on roadways. In urban and suburban areas, wastewater, weathering of infrastructure, and salting on parking lots and sidewalks can also contribute to salt contamination, but little is known about how well these sources explain variation in stream conductivity and...
Authors
Allison H. Roy, Annika Quick, Rebecca L. Hale, Kristina G. Hopkins, Jack S. Soucie

Overcoming challenges in mapping hydrography and heterogeneity in urban landscapes Overcoming challenges in mapping hydrography and heterogeneity in urban landscapes

Understanding how water moves through a watershed is one of the most fundamental yet often complicated aspects of hydrology, especially in urban areas. Urban infrastructure and water management alter natural hydrological pathways in developed watersheds, which can violate assumptions of a watershed approach to ecosystem science. We focus on two aspects of urban landscapes that often...
Authors
Kristina G. Hopkins, Rebecca L. Hale, Krista A. Capps, John S. Kominoski, Jennifer L. Morse, Allison H. Roy, Andrew Blinn, Shuo Chen, Liz Ortiz Muñoz, Annika Quick, Jacob Rudolph

Declining reservoir elevations following a two-decade drought increase water temperatures and non-native fish passage facilitating a downstream invasion Declining reservoir elevations following a two-decade drought increase water temperatures and non-native fish passage facilitating a downstream invasion

River ecosystems are threatened by interactions among river regulation, non-native species, and climate change. Water use has exceeded supply in USA’s Colorado River basin draining its two largest storage reservoirs (Lake Powell and Lake Mead). In 2022, Lake Powell began releasing water from its lower epilimnion into the Grand Canyon segment of the Colorado River, which (1) increased...
Authors
Drew Elliot Eppehimer, Charles B. Yackulic, Lindsey Ann Bruckerhoff, Jianghao Wang, Kirk L. Young, Kevin R. Bestgen, Bryce Anthony Mihalevich, John C. Schmidt

Deformity, erosion, lesion, tumor, and parasite (DELT) anomalies in fish communities of the Chesapeake Bay watershed, USA: A regional assessment and potential landscape drivers Deformity, erosion, lesion, tumor, and parasite (DELT) anomalies in fish communities of the Chesapeake Bay watershed, USA: A regional assessment and potential landscape drivers

Fish diseases in freshwater ecosystems pose significant ecological and socioeconomic challenges, yet monitoring them in wild populations is complex due to interactions between pathogens, hosts, and environmental conditions. We examine the prevalence and watershed-scale landscape drivers of external deformity, erosion, lesion, tumor, and parasite (DELT) anomalies in 57 riverine fish...
Authors
Sara E. Breitmeyer, Paul McLaughlin, Vicki S. Blazer, Gregory E. Noe, Kelly Smalling, Timothy A. Wertz, Tyler Wagner

Hydrophone placement yields high variability in detection of Epinephelus striatus calls at a spawning site. Hydrophone placement yields high variability in detection of Epinephelus striatus calls at a spawning site.

Passive acoustic monitoring is a cost-effective, minimally invasive technology commonly used to study behavior and population dynamics of soniferous fish species. To understand the strengths and limitations of acoustic monitoring for this purpose at fish spawning aggregations (FSA) requires an assessment of the variability in aggregation-associated sounds (AAS) as a function of time...
Authors
Cameron J. Van Horn, Alli C. Candelmo, Scott A. Heppell, Croy R.M. McCoy, Christine V. Pattengill-Semmens, Lynn Waterhouse, Laurent M. Cherubin, J. Christopher Taylor, William Michaels, James Locascio, Ali K. Ibrahim, Brice X. Semmens

Harmless tags or hazardous ads? Investigating the potential for ear tags to increase predation on neonatal ungulates Harmless tags or hazardous ads? Investigating the potential for ear tags to increase predation on neonatal ungulates

Studies involving individually marked animals provide insights predicated on the assumption marked individuals are accurate models of their unmarked counterparts. Taxa-specific and marker-specific examinations are needed to determine if marked animals are suitable models for the parameter(s) being measured. Our objective was to determine if brightly colored ear tags influenced the...
Authors
Matthew T. Turnley, W. Sue Fairbanks, Robert Charles Lonsinger, Michael J. Cherry, Marlin M. Dart, Randy W. DeYoung, Derek P. Hahn, Levi J. Heffelfinger, Celine M.J. Rickels, Evan P. Tanner, H. George Wang, M. Colter Chitwood

The American black bear (Ursus americanus) as an apex predator: Investigating the ecological role of the world’s most abundant large carnivore The American black bear (Ursus americanus) as an apex predator: Investigating the ecological role of the world’s most abundant large carnivore

Introduction American black bears (Ursus americanus) have been documented to have top-down effects, both consumptive (through predation) and nonconsumptive (through fear effects). However, their behavioural and dietary adaptability has led to uncertainty about the conditions under which these may occur.Objectives We aimed to (1) investigate when, where, and how often black bears...
Authors
John M. Nettles, Caroline M. Abramowitz, Wesley W. Boone, Stephen N. Harris, Chloe E. Horton, Meghan P. Keating, Dana L. Nelson, Samantha N. Smith, Katelyn N. Steen, Erin K. Buchholtz, David S. Jachowski
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