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Publications

This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.  

Filter Total Items: 43019

Ecological change drives a decline in mercury concentrations in southern Beaufort Sea polar bears Ecological change drives a decline in mercury concentrations in southern Beaufort Sea polar bears

We evaluated total mercury (THg) concentrations and trends in polar bears from the southern Beaufort Sea subpopulation from 2004 to 2011. Hair THg concentrations ranged widely among individuals from 0.6 to 13.3 μg g–1 dry weight (mean: 3.5 ± 0.2 μg g–1). Concentrations differed among sex and age classes: solitary adult females ≈ adult females with cubs ≈ subadults > adult males ≈...
Authors
Melissa A. McKinney, Todd C. Atwood, Sara Pedro, Elizabeth L. Peacock

Can wolves help save Japan's mountain forests? Can wolves help save Japan's mountain forests?

Japan’s wolves were extinct by 1905. Today Japan's mountain forests are being killed by overabundant sika deer and wild boars. Since the early 1990s, the Japan Wolf Association has proposed wolf reintroduction to Japan to restore rural ecology and to return a culturally important animal. In this article I discuss whether the return of wolves could help save Japan's mountain forests.
Authors
Shannon Barber-Meyer

Western bats as a reservoir of novel Streptomyces species with antifungal activity Western bats as a reservoir of novel Streptomyces species with antifungal activity

At least two-thirds of commercial antibiotics today are derived from Actinobacteria, more specifically from the genus Streptomyces. Antibiotic resistance and new emerging diseases pose great challenges in the field of microbiology. Cave systems, in which actinobacteria are ubiquitous and abundant, represent new opportunities for the discovery of novel bacterial species and the study of...
Authors
Paris S. Hamm, Nicole A. Caimi, Diana E. Northup, Ernest W. Valdez, Debbie C. Buecher, Christopher A. Dunlap, David P. Labeda, Shiloh Lueschow, Andrea Porras-Alfaro

Guidelines for evaluation and treatment of lead poisoning of wild raptors Guidelines for evaluation and treatment of lead poisoning of wild raptors

Lead poisoning is a threat to birds, particularly scavenging birds of prey. With the availability of portable lead-testing kits, an increasing number of field researchers are testing wild-caught birds, in situ, for lead poisoning. We describe guidelines for evaluation of lead toxicity in wild raptors by outlining field testing of blood-lead concentrations, presenting criteria for...
Authors
Jesse A. Fallon, Patrick Redig, Tricia A. Miller, Michael J. Lanzone, Todd E. Katzner

Aerodynamic roughness length estimation with lidar and imaging spectroscopy in a shrub-dominated dryland Aerodynamic roughness length estimation with lidar and imaging spectroscopy in a shrub-dominated dryland

The aerodynamic roughness length (Z0 m) serves an important role in the flux exchange between the land surface and atmosphere. In this study, airborne lidar (ALS), terrestrial lidar (TLS), and imaging spectroscopy data were integrated to develop and test two approaches to estimate Z0 m over a shrub dominated dryland study area in south-central Idaho, USA. Sensitivity of the two...
Authors
Aihua Li, Wenguang Zhao, Jessica J Mitchell, Nancy F. Glenn, Matthew J. Germino, Joel B. Sankey, Richard M. Allen

A multistate dynamic site occupancy model for spatially aggregated sessile communities A multistate dynamic site occupancy model for spatially aggregated sessile communities

Estimation of transition probabilities of sessile communities seems easy in principle but may still be difficult in practice because resampling error (i.e. a failure to resample exactly the same location at fixed points) may cause significant estimation bias. Previous studies have developed novel analytical methods to correct for this estimation bias. However, they did not consider the...
Authors
Keiichi Fukaya, J. Andrew Royle, Takehiro Okuda, Masahiro Nakaoka, Takashi Noda

Evaluating species-specific changes in hydrologic regimes: an iterative approach for salmonids in the Greater Yellowstone Area (USA) Evaluating species-specific changes in hydrologic regimes: an iterative approach for salmonids in the Greater Yellowstone Area (USA)

Despite the importance of hydrologic regimes to the phenology, demography, and abundance of fishes such as salmonids, there have been surprisingly few syntheses that holistically assess regional, species-specific trends in hydrologic regimes within a framework of climate change. Here, we consider hydrologic regimes within the Greater Yellowstone Area in the Rocky Mountains of western...
Authors
Robert K. Al-Chokhachy, Adam J. Sepulveda, Andrew M. Ray, David P. Thoma, Michael T. Tercek

Book review: Reptiles and amphibians: Self-assessment color review Book review: Reptiles and amphibians: Self-assessment color review

No abstract available. Book information: Reptiles and Amphibians: Self-Assessment Color Review. 2nd Edition. By Fredric L. Frye. CRC Press, Taylor and Francis Group, Boca Raton, Florida USA. 2015. 252 pp. ISBN 9781482257601.
Authors
David E. Green

Natural infections with pigeon paramyxovirus serotype 1: Pathologic changes in Eurasian collared-doves (Streptopelia decaocto) and rock pigeons (Columba livia) in the United States Natural infections with pigeon paramyxovirus serotype 1: Pathologic changes in Eurasian collared-doves (Streptopelia decaocto) and rock pigeons (Columba livia) in the United States

Pigeon paramyxovirus serotype 1 (PPMV-1) is a globally distributed, virulent member of the avian paramyxovirus serotype 1 serogroup that causes mortality in columbiformes and poultry. Following introduction into the United States in the mid-1980s, PPMV-1 rapidly spread causing numerous mortality events in Eurasian collared-doves (Streptopelia decaocto) (ECDOs) and rock pigeons (Columba...
Authors
Marcos Isidoro Ayza, C.L. Afonso, J.B. Stanton, Susan Knowles, S. Ip, C. LeAnn White, Heather Fenton, M.G. Ruder, A. C. Dolinski, Julia S. Lankton

Lambdapapillomavirus 2 in a gray wolf (Canis lupus) from Minnesota with oral papillomatosis and sarcoptic mange Lambdapapillomavirus 2 in a gray wolf (Canis lupus) from Minnesota with oral papillomatosis and sarcoptic mange

Oral papillomatosis was diagnosed in a gray wolf (Canis lupus) with sarcoptic mange from Minnesota, USA found dead in February 2015. Intranuclear inclusion bodies were evident histologically, and papillomaviral antigens were confirmed using immunohistochemistry. Sequencing of the L1 papillomavirus gene showed closest similarity to Lambdapapillomavirus 2.
Authors
Susan Knowles, Steve K. Windels, Marie Adams, Jeffrey S. Hall

Human infectious disease burdens decrease with urbanization but not with biodiversity Human infectious disease burdens decrease with urbanization but not with biodiversity

nfectious disease burdens vary from country to country and year to year due to ecological and economic drivers. Recently, Murray et al. (Murray CJ et al. 2012 Lancet 380, 2197–2223. (doi:10.1016/S0140-6736(12)61689-4)) estimated country-level morbidity and mortality associated with a variety of factors, including infectious diseases, for the years 1990 and 2010. Unlike other databases...
Authors
Chelsea L. Wood, Alex McInturff, Hillary S. Young, DoHyung Kim, Kevin D. Lafferty

Conservation, biodiversity and infectious disease: scientific evidence and policy implications Conservation, biodiversity and infectious disease: scientific evidence and policy implications

Habitat destruction and infectious disease are dual threats to nature and people. The potential to simultaneously advance conservation and human health has attracted considerable scientific and popular interest; in particular, many authors have justified conservation action by pointing out potential public health benefits . One major focus of this debate—that biodiversity conservation...
Authors
Hillary S. Young, Chelsea L. Wood, A. Marm Kilpatrick, Kevin D. Lafferty, Charles L. Nunn, Jeffrey R. Vincent
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