Publications
This list of publications includes peer-review journal articles, official USGS publications series, reports and more authored by scientists in the Ecosystems Mission Area. A database of all USGS publications, with advanced search features, can be accessed at the USGS Publications Warehouse.
Filter Total Items: 41950
Forecasting water levels using the ConvLSTM algorithm in the Everglades, USA
Forecasting water levels in complex ecosystems like wetlands can support effective water resource management, ecological conservation, and understanding surface and groundwater hydrology. Predictive models can be used to simulate the complex interactions among natural processes, hydrometeorological factors, and human activities. The Greater Everglades in the USA is a well-known example...
Authors
Raidan Bassah, Gerald A. Corzo Perez, Biswa Bhattacharya, Saira Haider, Eric D. Swain, Nicholas Aumen
An enigmatic wild passerine mortality event in the eastern United States
The ability to rapidly respond to wildlife health events is essential. However, such events are often unpredictable, especially with anthropogenic disturbances and climate-related environmental changes driving unforeseen threats. Many events also are short-lived and go undocumented, making it difficult to draw on lessons learned from past investigations. We report on the response to a...
Authors
Sabrina S. Greening, Julie C. Ellis, Nicole L. Lewis, David B. Needle, Cristina M. Tato, Susan Knowles, Valerie I. Shearn-Bochsler, Jaimie L. Miller, Daniel A. Grear, Jeffrey M. Lorch, David S. Blehert, Caitlin Burrell, Lisa A. Murphy, Erica A. Miller, C. Brandon Ogbunugafor, Andrea J. Ayala, W. Kelley Thomas, Megan S. Kirchgessner, Christine Casey, Ethan P. Barton, Michael J. Yabsley, Eman Anis, Roderick B. Gagne, Patrice Klein, Cindy P. Driscoll, Chelsea Sykes, Robert H. Poppenga, Nicole M. Nemeth
Understanding and predicting infection dynamics for an endangered amphibian using long-term surveys of wild and translocated frogs
Amphibians are a prominent component of Earth's sixth mass extinction and the fungal pathogen Batrachochytrium dendrobatidis (Bd) is a primary driver of declines. Although Bd dynamics are well studied, the environmental drivers, exacerbating risk factors, and value of conservation interventions like translocations remain challenging to predict. Here, we present results from two decades...
Authors
Talisin T. Hammond, Adam R. Backlin, Elizabeth Gallegos, Debra M. Shier, Ronald R. Swaisgood, Robert N. Fisher
Parentage and sibship relationships among captive snakes at the Phoenix Zoo—2024 data summary
IntroductionThe narrow-headed gartersnake (Thamnophis rufipunctatus) is listed as threatened under the Endangered Species Act (U.S. Fish and Wildlife Service, 2014). This species has a strong association with aquatic habitats, and these habitats have been highly altered by impoundments, land-use changes, and the introduction and spread of non-native aquatic species, which contributed to...
Authors
Dustin A. Wood, Anna Mitelberg, Amy G. Vandergast
Predictions of elk and chronic wasting disease dynamics at the National Elk Refuge in Jackson, Wyoming, and surrounding areas
The U.S. Fish and Wildlife Service National Elk Refuge (NER) in Jackson, Wyoming, supplementally feeds Cervus elaphus canadensis (elk) and Bison bison (American bison) during winter months, but the costs and benefits of this management strategy are being reevaluated considering the potential effects of chronic wasting disease (CWD) on elk. U.S. Geological Survey scientists worked with...
Authors
Paul C. Cross, Jonathan D. Cook, Eric K. Cole
Decision analysis in support of the National Elk Refuge bison and elk management plan
Preface This report was developed to evaluate the performance of a set of proposed alternatives for Cervus elaphus canadensis (elk) and Bison bison (bison) management at the National Elk Refuge (NER) in Wyoming, U.S.A., and to inform a National Environmental Policy Act Environmental Impact Statement focused on developing the next “Bison and Elk Management Plan” (BEMP). The U.S...
Evaluating elk distribution and conflict under proposed management alternatives at the National Elk Refuge in Jackson, Wyoming
We evaluated measurable attributes describing the current and future distribution of Cervus elaphus canadensis (elk) across a region surrounding Jackson, Wyoming, for five feedground management alternatives proposed by the U.S. Fish and Wildlife Service as a revision to the 2007 “Bison and Elk Management Plan” of the National Elk Refuge. A resource selection function evaluated measurable...
Authors
Gavin G. Cotterill, Paul C. Cross, Eric K. Cole, Jonathan D. Cook, Margaret C. Mceachran, Tabitha A. Graves
Exposure, sensitivity, or adaptive capacity? Reviewing assessments that use only two of three elements of climate change vulnerability
As climate change accelerates, understanding which species are most vulnerable and why they are vulnerable will be vital to inform conservation action. Climate change vulnerability assessments (CCVAs) are tools to assess species' responses to climate change, detect drivers of vulnerability, and inform conservation planning. CCVAs are commonly composed of three elements: exposure...
Authors
Amanda A. Hyman, Erin R. Crone, Abigail Benson, Jason B. Dunham, Abigail Lynch, Laura Thompson, Meryl C. Mims
Understanding the influence of image enhancement on underwater object detection: A quantitative and qualitative study
Underwater image enhancement is often perceived as a disadvantageous process to object detection. We propose a novel analysis of the interactions between enhancement and detection, elaborating on the potential of enhancement to improve detection. In particular, we evaluate object detection performance for each individual image rather than across the entire set to allow a direct...
Authors
Ashraf Saleem, Ali Awad, Sidike Paheding, Evan Lucas, Timothy C. Havens, Peter C. Esselman
Potential effects of chronic wasting disease and supplemental feeding on elk populations in Wyoming
IntroductionIn 2023, the U.S. Geological Survey, in collaboration with the U.S. Department of Agriculture Forest Service and the U.S. Fish and Wildlife Service, evaluated the costs and benefits of supplemental elk (Cervus elaphus canadensis) feeding in western Wyoming. Elk supplemental feeding is intended to maintain elk populations in the winter and limit elk damage to private property...
Authors
Paul C. Cross, Todd G. Wojtowicz
Holding time or fixative formulation has no obvious effect on histology of Porites evermanni and Montipora capitata
Collection of coral for histologic examination requires holding of samples in seawater for a time before they are fixed for histologic processing. This could adversely affect the interpretation of morphologic changes during histologic examinations. We evaluated the microscopic morphology of Porites evermanni and Montipora capitata held (0–120 minutes) in seawater prior to fixation in Z...
Authors
Thierry M. Work, Chutimon Singakharn, Amy Webb, Norton Chan, Michelle Dennis
Exposure to the Polychlorinated biphenyl mixture Aroclor 1254 elicits neurological and cardiac developmental effects in early life stage zebrafish (Danio rerio)
The goal of this study was to compare the bioaccumulation of the PCB mixture Aroclor 1254 in zebrafish to cardiac and neurologic outcomes. The establishment of effect concentrations (ECs) for cardiac and neurotoxic effects of PCBs in early life stage fish is challenging due to a lack of measured PCB concentrations in test media (e.g., fish tissue), the lack of standard exposure methods...
Authors
Corey A. Green, Jeffrey M. Morris, Jason Tyler Magnuson, Rachel Leads, Claire R. Lay, Michel Gielazyn, Lisa Rosman, Daniel Schlenk, Aaron P. Roberts