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Software

An official USGS software project is code reviewed and approved at the bureau-level for distribution.

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eDNAoccupancy eDNAoccupancy

This repository contains the source code and package for the eDNAoccupancy package. This readme file contains the installation instructions for the package. The purpose of the R package is to fit three-level occupancy models. Although designed with eDNA-based observations, the package can be used for any occupancy situation with sampling and sub-sampling.

landslides-mLS landslides-mLS

mLS is a function that estimates the landslide magnitude (mLS) from cutoff (smallest area that follows power law), beta (power-law exponent), and an array of areas derived from a landslide inventory following the methods of Tanyas and others (in prep). The function plots the best power-law fit for the medium and large landslides and the frequency-area distribution of the analyzed...

API - USGS Search API - USGS Search

The U.S. Geological Survey Search API is a custom JavaScript library useful for creating a location search widget in a webpage, typically in conjunction with a web map. The widget connects to a database created for the API, or Application-Programming Interface, to quickly find and suggest locations as the user enters text to navigate to areas of interest.

energySim: an R package Spatial energySim: an R package Spatial

Petroleum resource assessments provide statistical insight into the scale and spatial occurrence of oil and gas accumulations. Similarly, environmental or ecological assessments provide insight into the extent and patterns of ecological resources associated with ecosystems in a region. energySim is an implementation of an approach to link subsurface petroleum resources with ecological...

carpIPM R code carpIPM R code

Fish grow continuously. Integral projection models (IPM) model size continuously. We developed an IPM for fish. We specifically developed the model for grass carp, however, the model could also be applied to species with similar life-histories such as other carp species. We included YY-males within the model because releasing YY-males has been proposed a control method for the species...

R script for email delivery of sea ice imagery and charts to users with limited bandwidth R script for email delivery of sea ice imagery and charts to users with limited bandwidth

This software package represents an effort to enable access of sea ice charts and imagery in support of daily logistics planning where internet bandwidth and geoprocessing abilities are limited. The script acquires, processes and delivers these data in a format that may be manipulated by openly available virtual globe software, be visualized by software commonly installed on all smart...

Scenario Evaluator for Electrical Resistivity (SEER) Survey Pre-Modeling Tool Scenario Evaluator for Electrical Resistivity (SEER) Survey Pre-Modeling Tool

The USGS Scenario Evaluator for Electrical Resistivity (SEER) is a quick and simple Excel-based decision support tool practitioners can use to assess the likely outcome of using two-dimensional (2D) electrical resistivity imaging for site characterization and remediation monitoring.

Sediment Source Assessment Tool (Sed_SAT) Sediment Source Assessment Tool (Sed_SAT)

A sound understanding of sources contributing to instream sediment flux in a watershed is important when developing total maximum daily load (TMDL) management strategies designed to reduce suspended sediment in streams. Sediment fingerprinting and sediment budget approaches are two techniques, that when used jointly, can qualify and quantify the major sources of sediment in a given...

Fortran Program for Estimating Stream Transit Losses of Reusable Water, El Paso and Pueblo Counties, Colorado Fortran Program for Estimating Stream Transit Losses of Reusable Water, El Paso and Pueblo Counties, Colorado

The transit-loss accounting program, which has been in continuous daily use in some form since April 1989, has provided water-rights administrators with a tool to effectively manage RRFs and administer water diversion priorities along Fountain Creek on a daily basis.
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