Software
An official USGS software project is code reviewed and approved at the bureau-level for distribution.
Filter Total Items: 912
Matlab code to count acoustic impulses from coarse sediment particle collisions during sediment transport in rivers Matlab code to count acoustic impulses from coarse sediment particle collisions during sediment transport in rivers
This software release is a Matlab code that can be used to count acoustic impulses from coarse sediment particle collisions during sediment transport in rivers. The code also uses either a user defined threshold (preferred) or threshold computed from the overall noise of the audio files. Counts impulses exceeding the threshold which are assumed to be particle impacts of course (gravel...
Code for Two-stage approach to automatic detection with machine learning for improved surveillance of the invasive Cuban treefrog Code for Two-stage approach to automatic detection with machine learning for improved surveillance of the invasive Cuban treefrog
This R code release is associated with the paper, Huber, K., H. Waddle, B. Glorioso, and T. Donovan. Two-stage approach to automatic detection with machine learning for improved surveillance of the invasive Cuban treefrog. Ecological Infomatics. In revision. The code begins by downloading the database released on ScienceBase, and accompanying scripts included in this repository to...
Workflow to predict geochemical distributions of soil Workflow to predict geochemical distributions of soil
Mapping soil geochemistry across large spatial extents is essential for understanding mineral distributions and their environmental implications. However, rasters of soil geochemical distributions for the United States are limited. We present a Bayesian modeling framework for generating predictive geochemical distribution maps using integrated nested Laplace approximation in R (R-INLA).
Code for Chronic wasting disease (CWD) knowledge, risk perception, and management acceptance are influenced by media engagement and trust among deer hunters in Massachusetts Code for Chronic wasting disease (CWD) knowledge, risk perception, and management acceptance are influenced by media engagement and trust among deer hunters in Massachusetts
This repository contains all of the scripts to reproduce the analyses, figures, and tables associated with the manuscript Hoven et al. in prep. There is 1 Rmarkdown script that does the following: (1) format the data, (2) explores the data, and (3) goes through the analyses for each of the hypotheses (both linear models and path analysis).
A continental-scale integrated population model for the American kestrel A continental-scale integrated population model for the American kestrel
American kestrels have been declining in North America for several decades for unknown causes despite extensive research. We examined long-term population trends at a continental scale to eliminate statistical artifacts of immigration and immigration, and were able to identify trends in specific vital rates that can better inform future management actions. Included in this repository is...
Python Tools in Support of 'Geochemical Data for Rock, Sediment, Soil, and Mineral Samples, United States and Territories, 1962 to 2023' Python Tools in Support of 'Geochemical Data for Rock, Sediment, Soil, and Mineral Samples, United States and Territories, 1962 to 2023'
This software release consists of two tools for filtering and reformatting geochemical data from the associated data release of Granitto and others, 2025. They are provided as a Python toolbox for use in ArcGIS Pro, and scripts that can be used in the open-source software QGIS. Inputs to the ArcGIS tools should be stored in the file geodatabase or GeoPackage formats. The QGIS tools can...