Software

Code to support the "Freshwater Habitat Potential for Chinook Salmon in the Yukon and Kuskokwim River Basins, Alaska" project dataset. These Python notebooks and scripts process synthetic stream networks and DEMs to create unique reach contributing areas (uRCAs) and uRCA valley bottoms (uRCA VBs). The Python notebooks are designed to be run within ESRI ArcPro software and utilize the...

Python package with functionality for the quality assurance, harmonization, and analysis of water-well records. It was developed in support of the U.S. Geological Survey (USGS) National Water-Well Database (NWWDB) as part of the National Hydrologic Geospatial Fabric (NHGF) project.

This python package works with Quarto MarkDown files to allow authors to supply dois for references while writing a document. Tools in this utilities package provide the ability to automatically query https://doi.org to return valid BiBTeX entries from dois. Further utilities allow users to supply a list of dois, look up the BiBTeX entries, and update them into a new or existing BiBTeX...

This repository contains a journal template for the Journal of Fish and Wildlife Management. The template uses Quarto, a Markdown-based "open-source scientific and technical publishing system." The template uses an MS Word file as a template to format a manuscript for the Journal of Fish and Wildlife Management. Users will want to edit the qmd file and the bib file if they adapt this...

Amid climate change and rapidly shifting land uses, effective methods for monitoring natural resources are critical to support scientifically-informed resource management decisions. The practice of using Autonomous Monitoring Units (AMUs) to monitor wildlife species has grown immensely in the past decade, with monitoring projects across species from birds, to bats, amphibians, insects...

Model Viewer is a computer program that displays the results of three-dimensional ground-water models. Scalar data (such as hydraulic head or solute concentration) may be displayed as a solid or a set of isosurfaces, using a red-to-blue color spectrum or a custom color scale to represent a range of scalar values. Vector data (such as velocity or specific discharge) are represented by...

The GrAdient-Related Discharge in an Everglades Network (GARDEN) software computes flow in the Greater Everglades with a command-line Python script (Python Software Foundation. The script validates command-line arguments, fetches necessary EDEN water-level and depth data by means of the Xarray Python package, and then converts the data to imperial units (centimeters to feet). The main...

The operational Simplified Surface Energy Balance (SSEBop) Earth Resources Observation and Science center (EROS) Science Processing Architecture (ESPA) Open Source project provides tools for processing satellite imagery data to generate evapotranspiration (ET) products. The tools include functionalities for: Processing ESPA files to generate ET fraction (ETf) and actual...

The operational Simplified Surface Energy Balance (SSEBop) Earth Resources Observation and Science center (EROS) Science Processing Architecture (ESPA) Open Source project provides tools for processing satellite imagery data to generate evapotranspiration (ET) products. The tools include functionalities for: Processing ESPA files to generate ET fraction (ETf) and actual...

This repository contains an example application of the Meta-IPM Python package (https://doi.org/10.5066/P9427H6M). The specific application focuses on the Illinois River using existing public data. The code for this project assumes the reader is familiar with Jupyter Notebooks, enough Conda and Python to install the Meta-IPM package, and population ecology. The example also assumes the...

ModelViewer is a program for three-dimensional visualization of groundwater model results.

Classifying UAS soil burn severity and scaling up to satellite with Python