Publications
Browse publications authored by our scientists. Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
Filter Total Items: 5294
Future of Pacific salmon in the face of environmental change: Lessons from one of the world's remaining productive salmon regions Future of Pacific salmon in the face of environmental change: Lessons from one of the world's remaining productive salmon regions
Pacific salmon Oncorhynchus spp. face serious challenges from climate and landscape change, particularly in the southern portion of their native range. Conversely, climate warming appears to be allowing salmon to expand northwards into the Arctic. Between these geographic extremes, in the Gulf of Alaska region, salmon are at historically high abundances but face an uncertain future due...
Authors
Erik R. Schoen, Mark S. Wipfli, Jamie Trammell, Daniel J. Rinella, Angelica L. Floyd, Jess Grunblatt, Molly D. McCarthy, Benjamin E. Meyer, John M. Morton, James E. Powell, Anupma Prakash, Matthew N. Reimer, Svetlana L. Stuefer, Horacio Toniolo, Brett M. Wells, Frank D. W. Witmer
Regime shifts and panarchies in regional scale social-ecological water systems Regime shifts and panarchies in regional scale social-ecological water systems
In this article we summarize histories of nonlinear, complex interactions among societal, legal, and ecosystem dynamics in six North American water basins, as they respond to changing climate. These case studies were chosen to explore the conditions for emergence of adaptive governance in heavily regulated and developed social-ecological systems nested within a hierarchical governmental...
Authors
Lance Gunderson, Barbara Cosens, Brian C. Chaffin, Craig Anthony Arnold, Alexander K. Fremier, Ahjond S. Garmestani, Robin Kundis Craig, Hannah Gosnell, Hannah E. Birge, Craig R. Allen, Melinda H. Benson, Ryan R. Morrison, Mark Stone, Joseph A. Hamm, Kristine T. Nemec, Edella Schlager, Dagmar Llewellyn
CWDPRNP: A tool for cervid prion sequence analysis in program R CWDPRNP: A tool for cervid prion sequence analysis in program R
Chronic wasting disease is a fatal, neurological disease caused by an infectious prion protein, which affects economically and ecologically important members of the family Cervidae. Single nucleotide polymorphisms within the prion protein gene have been linked to differential susceptibility to the disease in many species. Wildlife managers are seeking to determine the frequencies of...
Authors
William L. Miller, W. David Walter
Estimating Mudpuppy (Necturus maculosus) abundance in the Lamoille River, Vermont, USA Estimating Mudpuppy (Necturus maculosus) abundance in the Lamoille River, Vermont, USA
The Mudpuppy (Necturus maculosus) is classified as a Species of Greatest Conservation Need by the state of Vermont. There is concern regarding status of populations in the Lake Champlain basin because of habitat alteration and potential effects of 3-trifluromethyl-4-nitrophenol (TFM), a chemical used to control Sea Lamprey (Petromyzon marinus). The purpose of our research was to assess...
Authors
Isaac C. Chellman, Donna L. Parrish, Therese M. Donovan
Environmental conditions and prey-switching by a seabird predator impact juvenile salmon survival Environmental conditions and prey-switching by a seabird predator impact juvenile salmon survival
Due to spatio-temporal variability of lower trophic-level productivity along the California Current Ecosystem (CCE), predators must be capable of switching prey or foraging areas in response to changes in environmental conditions and available forage. The Gulf of the Farallones in central California represents a biodiversity hotspot and contains the largest common murre (Uria aalge)...
Authors
Brian K. Wells, Jarrod A. Santora, Mark J. Henderson, Peter Warzybok, Jaime Jahncke, Russell W. Bradley, David D. Huff, Isaac D. Schroeder, Peter Nelson, John C. Field, David G. Ainley
Evaluating and improving count-based population inference: A case study from 31 years of monitoring Sandhill Cranes Evaluating and improving count-based population inference: A case study from 31 years of monitoring Sandhill Cranes
Monitoring animal populations can be difficult. Limited resources often force monitoring programs to rely on unadjusted or smoothed counts as an index of abundance. Smoothing counts is commonly done using a moving-average estimator to dampen sampling variation. These indices are commonly used to inform management decisions, although their reliability is often unknown. We outline a...
Authors
Brian D. Gerber, William L. Kendall
Using long-term data to predict fish abundance: the case of Prochilodus lineatus (Characiformes, Prochilodontidae) in the intensely regulated upper Paraná River Using long-term data to predict fish abundance: the case of Prochilodus lineatus (Characiformes, Prochilodontidae) in the intensely regulated upper Paraná River
Populations show spatial-temporal fluctuations in abundance, partly due to random processes and partly due to self-regulatory processes. We evaluated the effects of various external factors on the population numerical abundance of curimba Prochilodus lineatus in the upper Paraná River floodplain, Brazil, over a 19-year period. Panel data analysis was applied to examine the structure of...
Authors
Pitagoras A. Piana, Barbara F. Cardoso, Joilson Dias, Luiz C. Gomes, Angelo A. Agostinho, Leandro E. Miranda
Groundwater declines are linked to changes in Great Plains stream fish assemblages Groundwater declines are linked to changes in Great Plains stream fish assemblages
Groundwater pumping for agriculture is a major driver causing declines of global freshwater ecosystems, yet the ecological consequences for stream fish assemblages are rarely quantified. We combined retrospective (1950–2010) and prospective (2011–2060) modeling approaches within a multiscale framework to predict change in Great Plains stream fish assemblages associated with groundwater...
Authors
Joshuah S. Prekins, Keith B. Gido, Jeffrey A. Falke, Kurt D. Fausch, Harry Crockett, Eric R. Johnson, John Sanderson
Balancing stability and flexibility in adaptive governance: An analysis of tools available in U.S. environmental law Balancing stability and flexibility in adaptive governance: An analysis of tools available in U.S. environmental law
Adaptive governance must work “on the ground,” that is, it must operate through structures and procedures that the people it governs perceive to be legitimate and fair, as well as incorporating processes and substantive goals that are effective in allowing social-ecological systems (SESs) to adapt to climate change and other impacts. To address the continuing and accelerating alterations...
Authors
Robin Kundis Craig, Ahjond S. Garmestani, Craig R. Allen, Craig Anthony Arnold, Hannah E. Birge, Daniel A. DeCaro, Alexander K. Fremier, Hannah Gosnell, Edella Schlager
Accounting for imperfect detection of groups and individuals when estimating abundance Accounting for imperfect detection of groups and individuals when estimating abundance
If animals are independently detected during surveys, many methods exist for estimating animal abundance despite detection probabilities
Authors
Matthew J. Clement, Sarah J. Converse, J. Andrew Royle
Network analysis of a regional fishery: Implications for management of natural resources, and recruitment and retention of anglers Network analysis of a regional fishery: Implications for management of natural resources, and recruitment and retention of anglers
Angler groups and water-body types interact to create a complex social-ecological system. Network analysis could inform detailed mechanistic models on, and provide managers better information about, basic patterns of fishing activity. Differences in behavior and reservoir selection among angler groups in a regional fishery, the Salt Valley fishery in southeastern Nebraska, USA, were...
Authors
Dustin R. Martin, Daizaburo Shizuka, Christopher J. Chizinski, Kevin L. Pope
Development of a foraging model framework to reliably estimate daily food consumption by young fishes Development of a foraging model framework to reliably estimate daily food consumption by young fishes
We developed a foraging model for young fishes that incorporates handling and digestion rate to estimate daily food consumption. Feeding trials were used to quantify functional feeding response, satiation, and gut evacuation rate. Once parameterized, the foraging model was then applied to evaluate effects of prey type, prey density, water temperature, and fish size on daily feeding rate...
Authors
David Deslauriers, Alex J. Rosburg, Steven R. Chipps