Publications
Browse publications authored by our scientists. Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more.
**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.
Filter Total Items: 5294
Dynamic optimization of landscape connectivity embedding spatial-capture-recapture information Dynamic optimization of landscape connectivity embedding spatial-capture-recapture information
Maintaining landscape connectivity is increasingly important in wildlife conservation, especially for species experiencing the effects of habitat loss and fragmentation. We propose a novel approach to dynamically optimize landscape connectivity. Our approach is based on a mixed integer program formulation, embedding a spatial capture-recapture model that estimates the density, space...
Authors
Yexiang Xue, Xiaojian Wu, Dana J. Morin, Bistra Dilkina, Angela K. Fuller, J. Andrew Royle, Carla P. Gomes
Differences in human versus lightning fires between urban and rural areas of the boreal forest in interior Alaska Differences in human versus lightning fires between urban and rural areas of the boreal forest in interior Alaska
In western North America, the carbon-rich boreal forest is experiencing warmer temperatures, drier conditions and larger and more frequent wildfires. However, the fire regime is also affected by direct human activities through suppression, ignition, and land use changes. Models are important predictive tools for understanding future conditions but they are based on regional...
Authors
Monika Calef, Anna Varvak, A. David McGuire
Basis function models for animal movement Basis function models for animal movement
Advances in satellite-based data collection techniques have served as a catalyst for new statistical methodology to analyze these data. In wildlife ecological studies, satellite-based data and methodology have provided a wealth of information about animal space use and the investigation of individual-based animal–environment relationships. With the technology for data collection...
Authors
Mevin Hooten, Devin S. Johnson
Potential for spatial displacement of Cook Inlet beluga whales by anthropogenic noise in critical habitat Potential for spatial displacement of Cook Inlet beluga whales by anthropogenic noise in critical habitat
The population of beluga whales in Cook Inlet, Alaska, USA, declined by nearly half in the mid-1990s, primarily from an unsustainable harvest, and was listed as endangered in 2008. In 2014, abundance was ~340 whales, and the population trend during 1999-2014 was -1.3% yr-1. Cook Inlet beluga whales are particularly vulnerable to anthropogenic impacts, and noise that has the potential to...
Authors
Robert J. Small, Brian M. Brost, Mevin Hooten, Manuel Castellote, Jeffrey Mondragon
Survival, movement, and distribution of juvenile Burbot in a tributary of the Kootenai River Survival, movement, and distribution of juvenile Burbot in a tributary of the Kootenai River
Burbot Lota lota in the lower Kootenai River, Idaho, have been the focus of extensive conservation efforts, particularly the release of hatchery-reared juvenile Burbot into small tributaries. The Idaho Department of Fish and Game installed a fixed PIT antenna on Deep Creek, a tributary of the Kootenai River, to evaluate movement of juvenile Burbot to the Kootenai River. Since then...
Authors
Zachary S. Beard, Michael C. Quist, Ryan S. Hardy, Tyler J. Ross
The fishery resources of the Mississippi River: A model for conservation and management The fishery resources of the Mississippi River: A model for conservation and management
The Mississippi River is a multijurisdictional and multiuse resource that has been variously altered and is foremost managed for navigation and flood control throughout much of its 3,734‐km passage from its origin at Lake Itasca, Minnesota, to its outlet at the Gulf of Mexico. Despite alterations summarized herein, the native fish fauna remains largely intact and only five nonnative...
Authors
Harold L. Schramm
Tools to minimize interlaboratory variability in vitellogenin gene expression monitoring programs Tools to minimize interlaboratory variability in vitellogenin gene expression monitoring programs
The egg yolk precursor protein vitellogenin is widely used as a biomarker of estrogen exposure in male fish. However, standardized methodology is lacking and little is known regarding the reproducibility of results among laboratories using different equipment, reagents, protocols, and data analysis programs. To address this data gap we tested the reproducibility across laboratories to...
Authors
Aaron Jastrow, Denise A. Gordon, Kasie M. Auger, Elizabeth C. Punska, Kathleen F. Arcaro, Kristen Keteles, Dana L. Winkelman, David Lattier, Adam Biales, James M. Lazorchak
Defining a Safe Operating Space for inland recreational fisheries Defining a Safe Operating Space for inland recreational fisheries
The Safe Operating Space (SOS) of a recreational fishery is the multidimensional region defined by levels of harvest, angler effort, habitat, predation and other factors in which the fishery is sustainable into the future. SOS boundaries exhibit trade-offs such that decreases in harvest can compensate to some degree for losses of habitat, increases in predation and increasing value of...
Authors
Stephen R. Carpenter, William A. Brock, Gretchen J. A. Hansen, Jonathan F. Hansen, Joseph M. Hennessy, Daniel A. Isermann, Eric J. Pedersen, K. Martin Perales, Andrew L. Rypel, Greg G. Sass, Tyler D. Tunney, M. Jake Vander Zanden
Examining spatial patterns of selection and use for an altered predator guild Examining spatial patterns of selection and use for an altered predator guild
Anthropogenic disturbances have altered species’ distributions potentially impacting interspecific interactions. Interference competition is when one species denies a competing species access to a resource. One mechanism of interference competition is aggression, which can result in altered space-use of a subordinate species due to the threat of harm, otherwise known as a ‘landscape of...
Authors
John F. Organ, Matthew Mumma, Joseph D. Holbrook, Nathaniel D. Rayl, Christopher J. Zieminski, Todd K. Fuller, Shane P. Mahoney, Lisette P. Waits
Hydrological responses to channelization and the formation of valley plugs and shoals Hydrological responses to channelization and the formation of valley plugs and shoals
Rehabilitation of floodplain systems focuses on restoring interactions between the fluvial system and floodplain, however, there is a paucity of information on the effects of valley plugs and shoals on floodplain hydrological processes. We investigated hydrologic regimes in floodplains at three valley plug sites, two shoal sites, and three unchannelized sites. Valley plug sites had...
Authors
Aaron R. Pierce, Sammy L. King
Organizing the pantry: cache management improves quality of overwinter food stores in a montane mammal Organizing the pantry: cache management improves quality of overwinter food stores in a montane mammal
Many mammals create food stores to enhance overwinter survival in seasonal environments. Strategic arrangement of food within caches may facilitate the physical integrity of the cache or improve access to high-quality food to ensure that cached resources meet future nutritional demands. We used the American pika (Ochotona princeps), a food-caching lagomorph, to evaluate variation in...
Authors
Rhiannon P. Jakopak, L. Embere Hall, Anna D. Chalfoun