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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5350

Temporal variation in viral hemorrhagic septicemia virus antibodies in freshwater drum (Aplodinotus grunniens) indicates cyclic transmission in Lake Winnebago, Wisconsin Temporal variation in viral hemorrhagic septicemia virus antibodies in freshwater drum (Aplodinotus grunniens) indicates cyclic transmission in Lake Winnebago, Wisconsin

Viral hemorrhagic septicemia virus (VHSV) is an emerging pathogen that causes mass mortality in multiple fish species. In 2007, the Great Lakes freshwater strain, type IVb, caused a large die-off of freshwater drum (Aplodinotus grunniens) in Lake Winnebago, Wisconsin, USA. To evaluate the persistence and transmission of VHSV, freshwater drum from Lake Winnebago were tested for antibodies...
Authors
Anna Wilson-Rothering, Susan Marcquenski, Ryan P. Koenigs, Ronald Bruch, Kendall Kamke, Daniel A. Isermann, Andrew Thurman, Kathy Toohey-Kurth, Tony Goldberg

Atypical den use of Carolina Northern Flying Squirrels (Glaucomys sabrinus coloratus) in the southern Appalachian Mountains Atypical den use of Carolina Northern Flying Squirrels (Glaucomys sabrinus coloratus) in the southern Appalachian Mountains

Glaucomys sabrinus coloratus (Carolina Northern Flying Squirrel) is a federally endangered subspecies that occurs in high elevation forests of the southern Appalachian Mountains. Denning sites may be a limiting factor for this subspecies in areas where cavity trees are not abundant or where interspecific competition from other tree squirrels occurs. This shortage can result in use of...
Authors
Corinne A. Diggins, Christine A. Kelly, W. Mark Ford

Linking resource selection and mortality modeling for population estimation of mountain lions in Montana Linking resource selection and mortality modeling for population estimation of mountain lions in Montana

To be most effective, the scale of wildlife management practices should match the range of a particular species’ movements. For this reason, combined with our inability to rigorously or regularly census mountain lion populations, several authors have suggested that mountain lions be managed in a source-sink or metapopulation framework. We used a combination of resource selection...
Authors
Hugh S. Robinson, Toni K. Ruth, Justin A. Gude, David Choate, Rich DeSimone, Mark Hebblewhite, Marc R. Matchett, Michael S. Mitchell, Kerry Murphy, Jim Williams

A critical assessment of the ecological assumptions underpinning compensatory mitigation of salmon-derived nutrients A critical assessment of the ecological assumptions underpinning compensatory mitigation of salmon-derived nutrients

We critically evaluate some of the key ecological assumptions underpinning the use of nutrient replacement as a means of recovering salmon populations and a range of other organisms thought to be linked to productive salmon runs. These assumptions include: (1) nutrient mitigation mimics the ecological roles of salmon, (2) mitigation is needed to replace salmon-derived nutrients and...
Authors
Scott F. Collins, Amy M. Marcarelli, Colden V. Baxter, Mark S. Wipfli

Rising methane emissions from northern wetlands associated with sea ice decline Rising methane emissions from northern wetlands associated with sea ice decline

The Arctic is rapidly transitioning toward a seasonal sea ice-free state, perhaps one of the most apparent examples of climate change in the world. This dramatic change has numerous consequences, including a large increase in air temperatures, which in turn may affect terrestrial methane emissions. Nonetheless, terrestrial and marine environments are seldom jointly analyzed. By comparing...
Authors
Frans-Jan W. Parmentier, Wenxin Zhang, Xudong Zhu, Jacobus van Huissteden, Daniel J. Hayes, Qianlai Zhuang, Torben R. Christensen, A. David McGuire

Optimal population prediction of sandhill crane recruitment based on climate-mediated habitat limitations Optimal population prediction of sandhill crane recruitment based on climate-mediated habitat limitations

Prediction is fundamental to scientific enquiry and application; however, ecologists tend to favour explanatory modelling. We discuss a predictive modelling framework to evaluate ecological hypotheses and to explore novel/unobserved environmental scenarios to assist conservation and management decision-makers. We apply this framework to develop an optimal predictive model for juvenile (
Authors
Brian D. Gerber, William L. Kendall, Mevin Hooten, James A. Dubovsky, Roderick C. Drewien

Monitoring landscape-level distribution and migration Phenology of Raptors using a volunteer camera-trap network Monitoring landscape-level distribution and migration Phenology of Raptors using a volunteer camera-trap network

Conservation of animal migratory movements is among the most important issues in wildlife management. To address this need for landscape-scale monitoring of raptor populations, we developed a novel, baited photographic observation network termed the “Appalachian Eagle Monitoring Program” (AEMP). During winter months of 2008–2012, we partnered with professional and citizen scientists in...
Authors
David S. Jachowski, Todd E. Katzner, Jane L. Rodrigue, W. Mark Ford

Catchment-wide survival of wild- and hatchery-reared Atlantic salmon smolts in a changing system Catchment-wide survival of wild- and hatchery-reared Atlantic salmon smolts in a changing system

We developed a hierarchical multistate model to estimate survival of Atlantic salmon (Salmo salar) smolts in the Penobscot River, USA, over a decade during which two mainstem dams were removed from the catchment. We investigated effects of (i) environmental factors, (ii) rearing history, and (iii) management actions, including dam removal, turbine shutdown, and installation of new...
Authors
Daniel S. Stich, Michael M. Bailey, Christopher M. Holbrook, Michael T. Kinnison, Joseph D. Zydlewski

Camera traps and mark-resight models: The value of ancillary data for evaluating assumptions Camera traps and mark-resight models: The value of ancillary data for evaluating assumptions

Unbiased estimators of abundance and density are fundamental to the study of animal ecology and critical for making sound management decisions. Capture–recapture models are generally considered the most robust approach for estimating these parameters but rely on a number of assumptions that are often violated but rarely validated. Mark-resight models, a form of capture–recapture, are...
Authors
Arielle W. Parsons, Theodore R. Simons, Kenneth H. Pollock, Michael K. Stoskopf, Jessica J. Stocking, Allan F. O’Connell

Grasshopper sparrow reproductive success and habitat use on reclaimed surface mines varies by age of reclamation Grasshopper sparrow reproductive success and habitat use on reclaimed surface mines varies by age of reclamation

We studied 3 mountaintop mining–valley fill (MTMVF) complexes in southern West Virginia, USA to examine grasshopper sparrow (Ammodramus savannarum pratensis) demographic response to different age classes of mine land reclamation. For 71 nests monitored during the 2001–2002 breeding seasons, overall nest success (36%) was within the range of nest success rates previously reported for this...
Authors
Petra Wood, Frank K. Ammer

Developing nondestructive techniques for managing conflicts between fisheries and double-crested cormorant colonies Developing nondestructive techniques for managing conflicts between fisheries and double-crested cormorant colonies

Double-crested cormorants (Phalacrocorax auritus) have been identified as the source of significant mortality to juvenile salmonids (Oncorhynchus spp.) in the Columbia River Basin. Management plans for reducing the size of a large colony on East Sand Island (OR, USA) in the Columbia River estuary are currently being developed. We evaluated habitat enhancement and social attraction as
Authors
Yasuko Suzuki, Daniel D. Roby, Donald E. Lyons, Karen Courtot, Ken Collis

The global status of freshwater fish age validation studies and a prioritization framework for future research The global status of freshwater fish age validation studies and a prioritization framework for future research

Age information derived from calcified structures is commonly used to estimate recruitment, growth, and mortality for fish populations. Validation of daily or annual marks on age structures is often assumed, presumably due to a lack of general knowledge concerning the status of age validation studies. Therefore, the current status of freshwater fish age validation studies was summarized...
Authors
Kevin L. Pope, Martin J. Hamel, Mark A. Pegg, Jonathan J. Spurgeon
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