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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. 

 

**Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

Filter Total Items: 5204

Occupancy modeling for improved accuracy and understanding of pathogen prevalence and dynamics Occupancy modeling for improved accuracy and understanding of pathogen prevalence and dynamics

Most pathogen detection tests are imperfect, with a sensitivity 100%, thereby resulting in the potential for a false negative, where a pathogen is present but not detected. False negatives in a sample inflate the number of non-detections, negatively biasing estimates of pathogen prevalence. Histological examination of tissues as a diagnostic test can be advantageous as multiple...
Authors
Michael E. Colvin, James T. Peterson, Michael L. Kent, Carl B. Schreck

Hybridization threatens shoal bass populations in the Upper Chattahoochee River Basin: Chapter 37 Hybridization threatens shoal bass populations in the Upper Chattahoochee River Basin: Chapter 37

Shoal bass are native only to the Apalachicola-Chattahoochee-Flint river system of Georgia, Alabama, and Florida, and are vulnerable to extinction as a result of population fragmentation and introduction of non-native species. We assessed the genetic integrity of isolated populations of shoal bass in the upper Chattahoochee River basin (above Lake Lanier, Big Creek, and below Morgan...
Authors
Elizabeth E Dakin, Brady A. Porter, Byron J. Freeman, James M. Long

Comparing models of Red Knot population dynamics Comparing models of Red Knot population dynamics

Predictive population modeling contributes to our basic scientific understanding of population dynamics, but can also inform management decisions by evaluating alternative actions in virtual environments. Quantitative models mathematically reflect scientific hypotheses about how a system functions. In Delaware Bay, mid-Atlantic Coast, USA, to more effectively manage horseshoe crab...
Authors
Conor P. McGowan

Importance of reservoir tributaries to spawning of migratory fish in the upper Paraná River Importance of reservoir tributaries to spawning of migratory fish in the upper Paraná River

Regulation of rivers by dams transforms previously lotic reaches above the dam into lentic ones and limits or prevents longitudinal connectivity, which impairs access to suitable habitats for the reproduction of many migratory fish species. Frequently, unregulated tributaries can provide important habitat heterogeneity to a regulated river and may mitigate the influence of impoundments...
Authors
P. S. da Silva, Maristela Cavicchioli Makrakis, Leandro E. Miranda, Sergio Makrakis, L. Assumpcao, S. Paula, Joao Henrique Pinheiro Dias, H. Marques

The role of depth in regulating water quality and fish assemblages in oxbow lakes The role of depth in regulating water quality and fish assemblages in oxbow lakes

We evaluated water quality and fish assemblages in deep (> 3.0 m; N = 7) and shallow ( 1.5 m; N = 6) floodplain lakes in the intensively cultivated Yazoo River Basin (Mississippi, USA) using indirect gradient multivariate procedures. Shallow lakes displayed wide diel oxygen fluctuations, some reaching hypoxic/anoxic conditions for extended periods of time, high suspended solids, and...
Authors
Daniel B. Goetz, Leandro E. Miranda, Robert Kroger, Caroline S. Andrews

Record long-distance movement of a Deer Mouse, Peromyscus maniculatus, in a New England montane boreal forest Record long-distance movement of a Deer Mouse, Peromyscus maniculatus, in a New England montane boreal forest

We report a single-season, non-homing movement of 4287 ± 10 m by an adult male Deer Mouse, Peromyscus maniculatus, in western Maine, United States, in summer 2014. The movement was achieved in two stages: 927 ± 3 m in four days and an additional 3360 ± 10 m in 44 days. This is approximately 40% greater than the previously documented maximum linear movement for an individual of this...
Authors
Connor M. Wood, Shawn T. McKinney

An assessment of fish assemblage structure in a large river An assessment of fish assemblage structure in a large river

The Penobscot River drains the largest watershed in Maine and once provided spawning and rearing habitats to 11 species of diadromous fishes. The construction of dams blocked migrations of these fishes and likely changed the structure and function of fish assemblages throughout the river. The proposed removal of two main-stem dams, improved upstream fish passage at a third dam, and...
Authors
Ian A. Kiraly, S.M. Coghlan, Joseph D. Zydlewski, D. Hayes

Using an experimental manipulation to determine the effectiveness of a stock enhancement program Using an experimental manipulation to determine the effectiveness of a stock enhancement program

We used an experimental manipulation to determine the impact of stocking 178 mm channel catfish Ictalurus punctatus in six impoundments. The study design consisted of equal numbers (two) of control, ceased-stock, and stocked treatments that were sampled one year before and two years after stocking. Relative abundance, growth, size structure, and average weight significantly changed over...
Authors
David R. Stewart, James M. Long

Response of crayfish to hyporheic water availability and excess sedimentation Response of crayfish to hyporheic water availability and excess sedimentation

Crayfish in many headwater streams regularly cope with seasonal drought. However, it is unclear how landscape changes affect the long-term persistence of crayfish populations. We designed two laboratory experiments to investigate the acute effects of common landscape stressors on crayfish: water withdrawal and sedimentation. The first experiment tested the interaction among water...
Authors
Joseph J. Dyer, Thomas A. Worthington, Shannon K. Brewer

Reservoir area of influence and implications for fisheries management Reservoir area of influence and implications for fisheries management

Understanding the spatial area that a reservoir draws anglers from, defined as the reservoir's area of influence, and the potential overlap of that area of influence between reservoirs is important for fishery managers. Our objective was to define the area of influence for reservoirs of the Salt Valley regional fishery in southeastern Nebraska using kernel density estimation. We used...
Authors
Dustin R. Martin, Christopher J. Chizinski, Kevin L. Pope

Modeling risk of pneumonia epizootics in bighorn sheep Modeling risk of pneumonia epizootics in bighorn sheep

Pneumonia epizootics are a major challenge for management of bighorn sheep (Ovis canadensis) affecting persistence of herds, satisfaction of stakeholders, and allocations of resources by management agencies. Risk factors associated with the disease are poorly understood, making pneumonia epizootics hard to predict; such epizootics are thus managed reactively rather than proactively. We...
Authors
Sarah N. Sells, Michael S. Mitchell, J. Joshua Nowak, Paul M. Lukacs, Neil J. Anderson, Jennifer M. Ramsey, Justin A. Gude, Paul R. Krausman
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