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Publications

Browse publications authored by our scientists.  Publications available are: USGS-authored journal articles, series reports, book chapters, other government publications, and more. **Disclaimer: The views expressed in Non-USGS publications are those of the author and do not represent the views of the USGS, Department of the Interior, or the U.S. Government.

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Predicting carnivore occurrence with noninvasive surveys and occupancy modeling Predicting carnivore occurrence with noninvasive surveys and occupancy modeling

Terrestrial carnivores typically have large home ranges and exist at low population densities, thus presenting challenges to wildlife researchers. We employed multiple, noninvasive survey methods—scat detection dogs, remote cameras, and hair snares—to collect detection–nondetection data for elusive American black bears (Ursus americanus), fishers (Martes pennanti), and bobcats (Lynx...
Authors
Robert A. Long, Therese M. Donovan, Paula MacKay, William J. Zielinski, Jeffrey S. Buzas

Environmental controls of wood entrapment in upper Midwestern streams Environmental controls of wood entrapment in upper Midwestern streams

Wood deposited in streams provides a wide variety of ecosystem functions, including enhancing habitat for key species in stream food webs, increasing geomorphic and hydraulic heterogeneity and retaining organic matter. Given the strong role that wood plays in streams, factors that influence wood inputs, retention and transport are critical to stream ecology. Wood entrapment, the process...
Authors
Eric C. Merten, Jacques Finlay, Lucinda Johnson, Raymond Newman, Heinz Stefan, Bruce C. Vondracek

Seasonal habitat shifts by benthic fishes in headwater streams Seasonal habitat shifts by benthic fishes in headwater streams

Fish-habitat associations in streams have been widely studied; however, temporal considerations have been neglected, particularly during the winter. We quantitatively sampled perennial headwater streams in the Missouri Ozarks during the summer (n = 13) and winter (n = 4) to evaluate possible habitat shifts by three benthic fishes at two spatial scales: channel unit and microhabitat...
Authors
Adam V. Rettig, Shannon K. Brewer

Radiotelemetry to estimate stream life of adult chum salmon in the McNeil River, Alaska Radiotelemetry to estimate stream life of adult chum salmon in the McNeil River, Alaska

Estimating salmon escapement is one of the fundamental steps in managing salmon populations. The area-under-the-curve (AUC) method is commonly used to convert periodic aerial survey counts into annual salmon escapement indices. The AUC requires obtaining accurate estimates of stream life (SL) for target species. Traditional methods for estimating SL (e.g., mark–recapture) are not...
Authors
Joshua Peirce, Edward O. Otis, Mark S. Wipfli, Erich H. Follmann

Scale-dependent factors affecting North American river otter distribution in the midwest Scale-dependent factors affecting North American river otter distribution in the midwest

The North American river otter (Lontra canadensis) is recovering from near extirpation throughout much of its range. Although reintroductions, trapping regulations and habitat improvements have led to the reestablishment of river otters in the Midwest, little is known about how their distribution is influenced by local- and landscape-scale habitat. We conducted river otter sign surveys...
Authors
Mackenzie R. Jeffress, Craig P. Paukert, Joanna B. Whittier, B. K. Sandercock, P. S. Gipson

Survival of migrating Atlantic salmon smolts through the Penobscot River, Maine: A pre-restoration assessment Survival of migrating Atlantic salmon smolts through the Penobscot River, Maine: A pre-restoration assessment

Survival, distribution, and behavior of hatchery (n = 493) and naturally reared (n = 133) smolts of Atlantic salmon Salmo salar migrating through the Penobscot River and estuary in Maine were evaluated with acoustic telemetry in 2005 and 2006. Survival and use of a secondary migration path (the Stillwater Branch) were estimated with a multistate mark–recapture model. Higher rates of...
Authors
Joseph D. Zydlewski, Michael T. Kinnison, Christopher M. Holbrook

Who's your momma? Recognizing maternal origin of juvenile steelhead using injections of strontium chloride to create transgenerational marks Who's your momma? Recognizing maternal origin of juvenile steelhead using injections of strontium chloride to create transgenerational marks

We sought to determine whether a strontium chloride injection could be used to create a transgenerational otolith mark in steelhead Oncorhynchus mykiss. Two strontium injection trials and a survey of strontium: calcium (Sr:Ca) ratios in juvenile steelhead from various steelhead hatcheries were conducted to test the feasibility of the technique. In both trials, progeny of fish injected...
Authors
Gene E. Shippentower, Carl B. Schreck, Scott A. Heppell

Influence of throat configuration and fish density on escapement of channel catfish from hoop nets Influence of throat configuration and fish density on escapement of channel catfish from hoop nets

In recent years, several state agencies have adopted the use of baited, tandemset hoop nets to assess lentic channel catfish Ictalurus punctatus populations. Some level of escapement from the net is expected because an opening exists in each throat of the net, although factors influencing rates of escapement from hoop nets have not been quantified. We conducted experiments to quantify...
Authors
Mark T. Porath, Larry D. Pape, Lindsey K. Richters

Shortnose sturgeon use small coastal rivers: The importance of habitat connectivity Shortnose sturgeon use small coastal rivers: The importance of habitat connectivity

Contrary to conventional wisdom for shortnose sturgeon (Acipenser brevirostrum), we document shortnose sturgeon use of habitats beyond large rivers. Telemetry data from 2008 to 2010 in the Gulf of Maine demonstrates that adult shortnose sturgeon (up to 70%) frequently move between Maine’s two largest rivers, the Kennebec and Penobscot Rivers. Even more interesting, small rivers located...
Authors
Gayle B. Zydlewski, M.T. Kinnison, P.E. Dionne, Joseph D. Zydlewski, Gail S. Wippelhauser

Depth as an organizer of fish assemblages in floodplain lakes Depth as an organizer of fish assemblages in floodplain lakes

Depth reduction is a natural process in floodplain lakes, but in many basins has been accelerated by anthropogenic disturbances. A diverse set of 42 floodplain lakes in the Yazoo River Basin (Mississippi, USA) was examined to test the hypothesis of whether depth reduction was a key determinant of water quality and fish assemblage structure. Single and multiple variable analyses were...
Authors
Leandro E. Miranda

Watershed morphology of highland and mountain ecoregions in eastern Oklahoma Watershed morphology of highland and mountain ecoregions in eastern Oklahoma

The fluvial system represents a nested hierarchy that reflects the relationship among different spatial and temporal scales. Within the hierarchy, larger scale variables influence the characteristics of the next lower nested scale. Ecoregions represent one of the largest scales in the fluvial hierarchy and are defined by recurring patterns of geology, climate, land use, soils, and...
Authors
D. K. Splinter, Daniel C. Dauwalter, R. A. Marston, William Fisher

Assessing the role of conspecific attraction in habitat restoration for Henslow's sparrows in Iowa Assessing the role of conspecific attraction in habitat restoration for Henslow's sparrows in Iowa

The presence of conspecific individuals may provide important cues about habitat quality for territorial songbirds. We tested the ability of a conspecific song playback system to attract Henslow’s sparrows to previously unoccupied restored habitat. We successfully attracted Heslow’s sparrows to 3 of 7 treatment plots using conspecific song playbacks and we found no Henslow’s sparrows in...
Authors
Jennifer A. Vogel, Rolf R. Koford, David L. Otis
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