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Publications

Find out more about Species Management Research Program through our publications. Browse the entire list below or by specific topics at the links below.

Filter Total Items: 667

Herring Disease Program - Annual Project Report 2012011-E, February 1, 2010-January 31, 2021 Herring Disease Program - Annual Project Report 2012011-E, February 1, 2010-January 31, 2021

We will investigate fish health factors that may be contributing to the failed recovery of Pacific herring populations in Prince William Sound. Field samples will provide infection and disease prevalence data from Prince William Sound and Sitka Sound to inform the age structured assessment (ASA) model, serological data will indicate the prior exposure history and future susceptibility of...
Authors
Paul Hershberger, Maureen K. Purcell

Temperature variation and host immunity regulate viral persistence in a salmonid host Temperature variation and host immunity regulate viral persistence in a salmonid host

Environmental variation has important effects on host–pathogen interactions, affecting large-scale ecological processes such as the severity and frequency of epidemics. However, less is known about how the environment interacts with host immunity to modulate virus fitness within hosts. Here, we studied the interaction between host immune responses and water temperature on the long-term...
Authors
David J. Paez, Rachel L. Powers, Peng Jia, Natalia Ballesteros, Gael Kurath, Kerry A. Naish, Maureen K. Purcell

Effects of tidally varying river flow on entrainment of juvenile salmon into Sutter and Steamboat Sloughs Effects of tidally varying river flow on entrainment of juvenile salmon into Sutter and Steamboat Sloughs

Survival of juvenile salmonids in the Sacramento–San Joaquin Delta (Delta) varies by migration route, and thus the proportion of fish that use each route affects overall survival through the Delta. Understanding factors that drive routing at channel junctions along the Sacramento River is therefore critical to devising management strategies that maximize survival. Here, we examine...
Authors
Jason G. Romine, Russell Perry, Paul Stumpner, Aaron R. Blake, Jon R. Burau

Hydropeaking intensity and dam proximity limit aquatic invertebrate diversity in the Colorado River Basin Hydropeaking intensity and dam proximity limit aquatic invertebrate diversity in the Colorado River Basin

River biodiversity is threatened globally by hydropower dams, and there is a need to understand how dam management favors certain species while filtering out others. We examined aquatic invertebrate communities within the tailwaters 0–24 km downstream of seven large hydropower dams in the Colorado River Basin of the western United States. We quantified aquatic invertebrate dominance...
Authors
Erin Abernathy, Jeffrey Muehlbauer, Theodore Kennedy, Jonathan D. Tonkin, Richard Van Driesche, David A. Lytle

Demographic and potential biological removal models identify raptor species sensitive to current and future wind energy Demographic and potential biological removal models identify raptor species sensitive to current and future wind energy

A central challenge in applied ecology is understanding the effect of anthropogenic fatalities on wildlife populations and predicting which populations may be particularly vulnerable and in greatest need of management attention. We used 3 approaches to investigate potential effects of fatalities from collisions with wind turbines on 14 raptor species for both current (106 GW) and...
Authors
James E. Diffendorfer, Jessica C. Stanton, Julie A. Beston, Wayne E. Thogmartin, Scott R. Loss, Todd E. Katzner, Douglas H. Johnson, Richard A. Erickson, Matthew D. Merrill, Margo D. Corum

Long-term shedding from fully convalesced individuals indicates that Pacific herring are a reservoir for viral hemorrhagic septicemia virus Long-term shedding from fully convalesced individuals indicates that Pacific herring are a reservoir for viral hemorrhagic septicemia virus

Processes that allow viral hemorrhagic septicemia (VHS) virus to persist in the marine environment remain enigmatic, owing largely to the presence of covert and cryptic infections in marine fishes during typical sub-epizootic periods. As such, marine host reservoirs for VHS virus have not been fully demonstrated, nor have the mechanism(s) by which infected hosts contribute to virus...
Authors
Paul Hershberger, Ashley MacKenzie, Jacob L. Gregg, M. D. Wilmot, Rachel L. Powers, Maureen K. Purcell

Investigation of otolith microstructure and composition for identification of rearing strategies and associated Baker Lake sockeye salmon (Oncorhynchus nerka) smolt production, Washington, 2016–17 Investigation of otolith microstructure and composition for identification of rearing strategies and associated Baker Lake sockeye salmon (Oncorhynchus nerka) smolt production, Washington, 2016–17

Baker River (Washington, USA) sockeye salmon (Oncorhynchus nerka) are a recovering Puget Sound stock that are aided by trap-and-haul and hatchery programs to mitigate for the presence of a high head dam. The relative contribution of hatchery and natural adults to overall production of smolts and recruits is unknown. The ability to identify three different sockeye production groups...
Authors
Kimberly A. Larsen, Lisa A. Wetzel, Karl D. Stenberg, Angie M. Lind-Null

Calcium concentrations in the lower Columbia River, USA, are generally sufficient to support invasive bivalve spread Calcium concentrations in the lower Columbia River, USA, are generally sufficient to support invasive bivalve spread

Dissolved calcium concentration [Ca2+] is thought to be a major factor limiting the establishment and thus the spread of invasive bivalves such as zebra (Dreissena polymorpha) and quagga (Dreissena bugensis) mussels. We measured [Ca2+] in 168 water samples collected along ~100 river-km of the lower Columbia River, USA, between June 2018 and March 2020. We found [Ca2+] to range from 13 to...
Authors
Stephen M. Bollens, John A. Harrison, Marc G. Kramer, Gretchen Rollwagen-Bollens, Timothy D. Counihan, Salvador B. Robb-Chavez, Sean T. Nolan

Virus shedding kinetics and unconventional virulence tradeoffs Virus shedding kinetics and unconventional virulence tradeoffs

Tradeoff theory, which postulates that virulence provides both transmission costs and benefits for pathogens, has become widely adopted by the scientific community. Although theoretical literature exploring virulence-tradeoffs is vast, empirical studies validating various assumptions still remain sparse. In particular, truncation of transmission duration as a cost of virulence has been...
Authors
Andrew R. Wargo, Gael Kurath, Robert J. Scott, Benjamin Kerr

Differential susceptibility of Yukon River and Salish Sea stocks of Chinook salmon Oncorhynchus tshawytscha to ichthyophoniasis Differential susceptibility of Yukon River and Salish Sea stocks of Chinook salmon Oncorhynchus tshawytscha to ichthyophoniasis

Preliminary evidence suggests that Chinook salmon Oncorhynchus tshawytscha from the Yukon River may be more susceptible to Ichthyophonus sp. infections than Chinook from stocks further south. To investigate this hypothesis in a controlled environment, we experimentally challenged juvenile Chinook from the Yukon River and from the Salish Sea with Ichthyophonus sp. and evaluated mortality...
Authors
Diane G. Elliott, Carla M. Conway, Constance L. McKibben, Ashley MacKenzie, Lucas M. Hart, Maya Groner, Maureen K. Purcell, Jacob L. Gregg, Paul Hershberger
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