A novel technique for isolating DNA from Tempus™ blood RNA tubes after RNA isolation
Objective
We use Tempus blood RNA tubes (Applied Biosystems) during health assessments of American moose (Alces alces spp.) as a minimally invasive means to obtain RNA. Here we describe a novel protocol to additionally isolate high-quality DNA from the supernatant remaining after the RNA isolation methodology. Metrics used to qualify DNA quality included measuring the concentration, obtaining a DNA integrity number from a genomic DNA ScreenTape assay (Agilent), and running the isolated DNA on an agarose gel.
Results
Of the 23 samples analyzed, the average DNA concentration was 121 ng/µl (range 4–337 ng/µl) and a genomic DNA ScreenTape assay of seven samples indicated high DNA integrity values for 6 of the 7 samples (range 9.1–9.4 out of 10). Of the DNA sent for genotyping by sequencing, all proved to be of sufficient integrity to yield high-quality next-generation sequence results. We recommend this simple procedure to maximize the yield of both RNA and DNA from blood samples.
Citation Information
| Publication Year | 2018 |
|---|---|
| Title | A novel technique for isolating DNA from Tempus™ blood RNA tubes after RNA isolation |
| DOI | 10.1186/s13104-018-3671-4 |
| Authors | Jason Ferrante, Michelle Giles, Emily Benzie, Margaret Hunter |
| Publication Type | Article |
| Publication Subtype | Journal Article |
| Series Title | BMC Research Notes |
| Index ID | 70198561 |
| Record Source | USGS Publications Warehouse |
| USGS Organization | Wetland and Aquatic Research Center |