Publications
USGS research activities relevant to Alaska have yielded more than 9400 historical publications. This page features some of the most recent newsworthy research findings.
Filter Total Items: 3096
Genomically diverse carbapenem resistant Enterobacteriaceae from wild birds provide insight into global patterns of spatiotemporal dissemination Genomically diverse carbapenem resistant Enterobacteriaceae from wild birds provide insight into global patterns of spatiotemporal dissemination
Carbapenem resistant Enterobacteriaceae (CRE) are a threat to public health globally, yet the role of the environment in the epidemiology of CRE remains elusive. Given that wild birds can acquire CRE, likely from foraging in anthropogenically impacted areas, and may aid in the maintenance and dissemination of CRE in the environment, a spatiotemporal comparison of isolates from different...
Authors
Christina Ahlstrom, Hanna Woksepp, Linus Sandegren, Mashkoor Mohsin, Badrul Hasan, Denys Muzyka, Jorge Hernandez, Filip Aguirre, Atalay Tok, Jan Soderman, Bjorn Olsen, Andrew M. Ramey, Jonas Bonnedahl
Premature mortality observations among Alaska’s Pacific salmon during record heat and drought in 2019 Premature mortality observations among Alaska’s Pacific salmon during record heat and drought in 2019
Widespread mortality of Pacific salmon Oncorhynchus spp. returning to spawn in Alaska coincided with record-breaking air temperatures and prolonged drought in summer 2019. Extreme environmental conditions are expected to happen more frequently with rapid climate change and challenge the notion that Alaska could indefinitely provide abundant, cool freshwater habitat for Pacific salmon. A...
Authors
Vanessa R. von Biela, Christopher J. Sergeant, Michael P. Carey, Zachary Liller, Charles M. Russell, Stephanie Quinn-Davidson, Peter S. Rand, P. A. H. Westley, Christian E. Zimmerman
Genetic assignment of fisheries bycatch reveals disproportionate mortality among Alaska Northern Fulmar breeding colonies Genetic assignment of fisheries bycatch reveals disproportionate mortality among Alaska Northern Fulmar breeding colonies
Global fisheries kill millions of seabirds annually through bycatch, but little is known about population-level impacts, particularly in species that form metapopulations. U.S. North Pacific groundfish fisheries catch thousands of Northern Fulmars (Fulmarus glacialis rodgersii) each year, making fulmars the most frequently caught seabird in federally managed U.S. fisheries. Here, we used...
Authors
Diana S. Baetscher, Jessie Beck, Eric C. Anderson, Kristen Ruegg, Andrew M. Ramey, Scott Hatch, HannahRose M. Nevins, Shannon Fitzgerald, J Carlos Garza
Juvenile continental crust evolution in a modern oceanic arc setting: Petrogenesis of Cenozoic felsic plutons in Fiji, SW Pacific Juvenile continental crust evolution in a modern oceanic arc setting: Petrogenesis of Cenozoic felsic plutons in Fiji, SW Pacific
Viti Levu, Fiji, provides one of the best exposed Phanerozoic analogues for the formation of juvenile continental crust in an intra-oceanic setting. Tonalites and trondhjemites are present in several large (75–150 km2) adjacent, mid-Cenozoic plutons. We report major and trace element data including rare earth element (REE) and high-precision high field strength element (HFSE)...
Authors
Chris S. Marien, Elizabeth Kathleen Drewes-Todd, Allen Stork, Erin Todd, James B Gill, J. Elis Hoffman, Kenichiro Tani, Charlotte M. Allen, Carsten Munker
The Pacific as the world’s greatest theater of bird migration: Extreme flights spark questions about physiological capabilities, behavior, and the evolution of migratory pathways The Pacific as the world’s greatest theater of bird migration: Extreme flights spark questions about physiological capabilities, behavior, and the evolution of migratory pathways
The Pacific Basin, by virtue of its vastness and its complex aeroscape, provides unique opportunities to address questions about the behavioral and physiological capabilities and mechanisms through which birds can complete spectacular flights. No longer is the Pacific seen just as a formidable barrier between terrestrial habitats in the north and the south, but rather as a gateway for...
Authors
Theunis Piersma, Robert E. Gill, Daniel R. Ruthrauff, Christopher G. Guglielmo, Jesse R. Conklin, Colleen M. Handel
Abundance and distribution of sea otters (Enhydra lutris) in the southcentral Alaska stock, 2014, 2017, and 2019 Abundance and distribution of sea otters (Enhydra lutris) in the southcentral Alaska stock, 2014, 2017, and 2019
The Southcentral Alaska (SCAK) sea otter (Enhydra lutris) stock is the northernmost stock of sea otters, a keystone predator known for structuring nearshore marine ecosystems. We conducted aerial surveys within the range of the SCAK sea otter stock to provide recent estimates of sea otter abundance and distribution. We defined three survey regions: (1) Eastern Cook Inlet (2017), (2)...
Authors
George G. Esslinger, Brian H. Robinson, Daniel H. Monson, Rebecca L. Taylor, Daniel Esler, Ben P. Weitzman, Joel Garlich-Miller
Diet analysis using generalized linear models derived from foraging processes using R package mvtweedie Diet analysis using generalized linear models derived from foraging processes using R package mvtweedie
Diet analysis integrates a wide variety of visual, chemical, and biological identification of prey. Samples are often treated as compositional data, where each prey is analyzed as a continuous percentage of the total. However, analyzing compositional data results in analytical challenges, for example, highly parameterized models or prior transformation of data. Here, we present a novel
Authors
James T. Thorson, Mayumi L. Arimitsu, Taal Levi, Gretchen Roffler
Multi-year, spatially extensive, watershed-scale synoptic stream chemistry and water quality conditions for six permafrost-underlain Arctic watersheds Multi-year, spatially extensive, watershed-scale synoptic stream chemistry and water quality conditions for six permafrost-underlain Arctic watersheds
Repeated sampling of spatially distributed river chemistry can be used to assess the location, scale, and persistence of carbon and nutrient contributions to watershed exports. Here, we provide a comprehensive set of water chemistry measurements and ecohydrological metrics describing the biogeochemical conditions of permafrost-affected Arctic watersheds. These data were collected in...
Authors
Arial Shogren, Jay P. Zarnetske, Benjamin Abbott, Samuel P. Bratsman, Brian C. Brown, Michael P. Carey, Randy Fulweiber, Heather Greaves, Emma Haines, Frances Iannucci, Joshua C. Koch, Alex Medvedeff, Jonathan A. O’Donnell, Leika Patch, Brett Poulin, Tanner J. Williamson, William B. Bowden
Distinct gut microbiomes in two polar bear subpopulations inhabiting different sea ice ecoregions Distinct gut microbiomes in two polar bear subpopulations inhabiting different sea ice ecoregions
Gut microbiomes were analyzed by 16S rRNA gene metabarcoding for polar bears (Ursus maritimus) from the southern Beaufort Sea (SB), where sea ice loss has led to increased use of land-based food resources by bears, and from East Greenland (EG), where persistent sea ice has allowed hunting of ice-associated prey nearly year-round. SB polar bears showed a higher number of total (940 vs...
Authors
Megan Franz, Lyle White, Todd C. Atwood, Kristin L. Laidre, Denis Roy, Sophie Watson, Esteban Gongora, Melissa McKinney
Highly pathogenic avian influenza is an emerging disease threat to wild birds in North America Highly pathogenic avian influenza is an emerging disease threat to wild birds in North America
Prior to the emergence of the A/goose/Guangdong/1/1996 (Gs/GD) H5N1 influenza A virus, the long-held and well-supported paradigm was that highly pathogenic avian influenza (HPAI) outbreaks were restricted to poultry, the result of cross-species transmission of precursor viruses from wild aquatic birds that subsequently gained pathogenicity in domestic birds. Therefore, management...
Authors
Andrew M. Ramey, Nichola J. Hill, Thomas J. DeLiberto, Samantha E. J. Gibbs, M. Camille Hopkins, Andrew S. Lang, Rebecca L. Poulson, Diann Prosser, Jonathan M. Sleeman, David E. Stallknecht, Xiu-Feng Wan
Species-specific responses to landscape features shaped genomic structure within Alaska galliformes Species-specific responses to landscape features shaped genomic structure within Alaska galliformes
Aim Connectivity is vital to the resiliency of populations to environmental change and stochastic events, especially for cold-adapted species as Arctic and alpine tundra habitats retract as the climate warms. We examined the influence of past and current landscapes on genomic connectivity in cold-adapted galliformes as a critical first step to assess the vulnerability of Alaska ptarmigan...
Authors
Sarah A. Sonsthagen, Robert E. Wilson, Sandra L. Talbot
Arctic geese in North America Arctic geese in North America
Multiple species of geese spend part of their annual cycle in the circumpolar Arctic and serve as a source of nutrition and cultural affirmation for many peoples. Arctic geese function as important indicators of environmental changes and some species also have the potential to alter ecosystem processes when they become overabundant. In 2022, despite an outbreak of highly pathogenic avian...
Authors
John M. Pearce, Josh Dooley, Vijay P. Patil, Todd L. Sformo, Bryan Daniels, Andy Greene, Jim Leafloor