Publications
Publications from USGS science centers throughout the Southeast Region.
Filter Total Items: 10382
What is eDNA method standardization and why do we need it? What is eDNA method standardization and why do we need it?
The rapid advancement of environmental DNA (eDNA) science in the past two decades has inspired a concomitant growth in the development of eDNA sampling and analytical methods. However, these methods are often developed by individual laboratories or institutions, which can isolate protocols within programmes, agencies or regions and prevent the beneficial exchange of data and ideas...
Authors
Susanna Theroux, Adam Sepulveda, Cathryn L. Abbott, Zachary Gold, Alison W. Watts, Margaret Hunter, Katy E. Klymus, Shana L. Hirsch, Joseph M. Craine, Devin Nicole Jones-Slobodian, Rachel J. Brown, Joshua A. Steele, Miwa Takahashi, Rachel T. Noble, John A. Darling
Time-varying rates of organic and inorganic mass accumulation in southeast Louisiana marshes: Relationships to sea-level anomalies and tropical storms Time-varying rates of organic and inorganic mass accumulation in southeast Louisiana marshes: Relationships to sea-level anomalies and tropical storms
Louisiana's coastal wetlands are complex systems that require a continuous input of organic and inorganic material to keep pace with relative sea-level rise. Coastal restoration projects such as sediment diversions are being implemented to mitigate land loss and increase availability of inorganic sediment to coastal wetlands, and marshes specifically rely on organic material to build...
Authors
Sophie Vincent, Carol Wilson, Gregg A. Snedden, Tracy Quirk
Continuous stream discharge, salinity, and associated data collected in the lower St. Johns River and its tributaries, Florida, 2022 Continuous stream discharge, salinity, and associated data collected in the lower St. Johns River and its tributaries, Florida, 2022
The U.S. Army Corps of Engineers, Jacksonville District, deepened the St. Johns River channel in Jacksonville, Florida, to accommodate larger, fully loaded cargo vessels. The U.S. Geological Survey (USGS), in cooperation with the U.S. Army Corps of Engineers, monitored stage, discharge, and (or) water temperature and salinity at 26 continuous data collection sites in the St. Johns River...
Authors
Jennifer N. Carson, Matthew T. Benacquisto
Streamflow, water quality, and constituent loads and yields, Scituate Reservoir drainage area, Rhode Island, water year 2022 Streamflow, water quality, and constituent loads and yields, Scituate Reservoir drainage area, Rhode Island, water year 2022
As part of a long-term cooperative program to monitor water quality within the Scituate Reservoir drainage area, the U.S. Geological Survey, in cooperation with Providence Water (formerly the Providence Water Supply Board), collected streamflow and water-quality data in tributaries to the Scituate Reservoir, Rhode Island. Streamflow and concentrations of chloride and sodium estimated...
Authors
Kirk Smith, Alana B. Spaetzel
Video evidence of a Red-eared Slider (Trachemys scripta elegans) preying upon a live Mallard (Anas platyrhynchos) duckling in Louisiana Video evidence of a Red-eared Slider (Trachemys scripta elegans) preying upon a live Mallard (Anas platyrhynchos) duckling in Louisiana
Most animal matter in the diet of the omnivorous Trachemys scripta (Pond Slider) consists of invertebrate prey items such as insects, crustaceans, and mollusks, but often also includes fish and amphibians. Reptiles, birds, and mammals are less commonly reported, and even when found, it is usually unknown if they were captured alive, as Pond Sliders will certainly scavenge dead animals...
Authors
Brad Glorioso, Alex Landry, Gabrielle Mandill
Spawning and larval development of the mesophotic octocoral Swiftia exserta in aquaria Spawning and larval development of the mesophotic octocoral Swiftia exserta in aquaria
The 2010 Deepwater Horizon oil spill injured mesophotic and deep-sea environments over a vast area. In order to restore mesophotic and deep-sea coral species impacted by the spill, information on fundamental ecosystem processes such as reproduction is needed. During expeditions in 2021 and 2022, fragments of the mesophotic octocoral Swiftia exserta were collected from the northern Gulf...
Authors
Julia W. Johnstone, William Jenkins, Mackenzy Jankiewicz, Jonathan M. Quigley, Janessy Frometa, Enrique Salgado, Ben Higgins, Amanda Demopoulos, Christopher L. Gardner, Peter J. Etnoyer, Kristopher G. Benson
Snapshots of mid-to-late Holocene sea-surface temperature variability from a subtropical western Atlantic coral reef Snapshots of mid-to-late Holocene sea-surface temperature variability from a subtropical western Atlantic coral reef
Large-scale Holocene climate reconstructions rely heavily on extratropical proxy records. Coral-based temperature reconstructions from the tropical and subtropical oceans therefore fill a critical spatial and temporal data gap, allowing for reconstruction of seasonally resolved temperature variability. We present five new, monthly-resolved sea-surface temperature (SST) reconstructions...
Authors
Jessica A. Jacobs, Julie N. Richey, Jennifer A. Flannery, Kaustubh Thiumalai, Lauren T. Toth
Waterfront property owners' shoreline preferences amid salt marsh to mangrove transitions Waterfront property owners' shoreline preferences amid salt marsh to mangrove transitions
1. We examined the influence of mangrove encroachment into salt marsh areas along the northern Gulf of Mexico (USA) on waterfront property owners' perceptions of coastal health and preferences for shoreline management. 2. Using mail-in and online surveys, we targeted over 3000 waterfront property owners across four jurisdictions experiencing or anticipating mangrove encroachment. 3. Our...
Authors
Jahson B. Alemu I, A. Randall Hughes, Michael Osland, Savannah H. Swinea, Kalaina A. Thorne, Remi Bardou, Christine C. Shepard, Steven B. Scyphers
Lower trophic level monitoring implementation plan for Barataria Basin: Protocols and programmatic management Lower trophic level monitoring implementation plan for Barataria Basin: Protocols and programmatic management
Prior work completed by Kiskaddon et al. (2021, 2022b, 2022a) identified critical data gaps for Lower Trophic Level (LTL) organisms in Barataria Basin, Louisiana. A Monitoring and Adaptive Management (MAM) Activity Implementation Plan (MAIP) was subsequently developed to describe a MAM Activity that would address and fill these critical data gaps (hereafter termed the “LTL project”). As...
Authors
Erin P. Kiskaddon, Sibel Bargu, Melissa Millman Baustian, Melissa Carle, Jean Cowan, Jennifer Doerr, Cassandra N. Glaspie, Brittany Jensen, Bingqing Liu, Emelia Marshall, Michael J. Polito, David B. Reeves, Shaye Sable, Malinda Sutor, Ian Zink
Exosomal micro RNA isolation in white-tailed deer (Odocoileus virginianus) for diagnostic biomarker discovery Exosomal micro RNA isolation in white-tailed deer (Odocoileus virginianus) for diagnostic biomarker discovery
Molecular approaches are becoming more prevalent for the diagnosis of neurodegenerative diseases in human medicine and can be extended to diagnosis of wildlife diseases such as chronic wasting disease and other prion diseases. These diseases have been associated with exosome-bound molecular biomarkers of disease progression, such as proteins and micro RNA molecules (miRNA). We tested and...
Authors
Maite De Maria, Lillian G. Maxwell, Margaret Hunter, Jason Ferrante
Abundance of microplastics in a typical urban wetland in China: Association with occurrence and carbon storage Abundance of microplastics in a typical urban wetland in China: Association with occurrence and carbon storage
Microplastics (MPs) are gaining attention for their widespread presence and toxicity in ecosystems. However, their role as a carbon source in urban wetland carbon sinks is still unclear. In this study, the microplastic-carbon (MP-C) was firstly quantified based on the abundance and occurrence characteristics, including MP morphology, size and type in the Sanyang Wetland, a typical urban...
Authors
Haowen Zhang, Mengjie Pu, Ming Zheng, Bentuo Xu, Jason Tyler Magnuson, Qiqing Chen, Xiangrong Xu, Xiangyong Zheng, Ming Zhao, Wenhui Qiu
Detection of the Diadema antillarum scuticociliatosis Philaster clade on sympatric metazoa, plankton, and abiotic surfaces and assessment for its potential reemergence Detection of the Diadema antillarum scuticociliatosis Philaster clade on sympatric metazoa, plankton, and abiotic surfaces and assessment for its potential reemergence
A ciliate belonging to the Diadema antillarum scuticociliatosis (DaSc)-associated Philaster clade (DaScPc) caused catastrophic long-spined urchin mass mortality in spring and summer of 2022. The ciliate can be grown in culture in both the presence and absence of D. antillarum tissues, suggesting that it may persist outside its host by consuming microorganisms or dissolved organic...
Authors
Brayan Vilanova-Cuevas, Katherine Philipp, Ashley Altera, Amy Apprill, Cynthia C. Becker, Donald Behringer, Marilyn E. Brandt, Mya Breitbart, Kayla A. Budd, Christopher M. DeRito, Elizabeth Duermit-Moreau, James S. Evans, Maria Hopson-Fernandes, Julian Fleischer, Samuel Gittens, Michael Henson, Alwin Hylkema, Christina A. Kellogg, Andrew Maritan, Julie L. Meyer, Zoe A. Pratte, Isabella T. Ritchie, Moriah L. B. Sevier, Matthew Souza, Frank J. Stewart, Sietske Van Der Wal, Sarah VonHoehne, Ian Hewson