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Publications

For more than a century, USGS scientists have conducted research in California’s Bay-Delta region. Informing natural-resource management decisions on the region’s issues, this research has been published in thousands of documents, some highlighted below.

Filter Total Items: 307

Utilization by fishes of the Alviso Island ponds and adjacent waters in south san francisco bay following restoration to tidal influence Utilization by fishes of the Alviso Island ponds and adjacent waters in south san francisco bay following restoration to tidal influence

Earthen levees of three isolated salt ponds known locally as the Alviso Island Ponds were intentionally breached in March 2006 to allow tidal exchange of the ponds with water from Coyote Creek. The water exchange transformed the previously fishless hypersaline ponds into lower salinity habitats suitable for fish life. This study documented fish utilization of the ponds, adjacent reaches...
Authors
M. K. Saiki, F.H. Mejia

Benthic flux of nutrients and trace metals in the northern component of San Francisco Bay, California Benthic flux of nutrients and trace metals in the northern component of San Francisco Bay, California

Two sets of sampling trips were coordinated in late summer 2008 (weeks of July 8 and August 6) to sample the interstitial and overlying bottom waters at 10 shallow locations (9 sites
Authors
James S. Kuwabara, Brent R. Topping, Francis Parcheso, Anita C. Engelstad, Valerie E. Greene

Earthquake stress drops and inferred fault strength on the Hayward Fault, east San Francisco Bay, California Earthquake stress drops and inferred fault strength on the Hayward Fault, east San Francisco Bay, California

We study variations in earthquake stress drop with respect to depth, faulting regime, creeping versus locked fault behavior, and wall-rock geology. We use the P-wave displacement spectra from borehole seismic recordings of M 1.0-4.2 earthquakes in the east San Francisco Bay to estimate stress drop using a stack-and-invert empirical Green's function method. The median stress drop is 8.7...
Authors
J.L. Hardebeck, A. Aron

A Viscoelastic earthquake simulator with application to the San Francisco Bay region A Viscoelastic earthquake simulator with application to the San Francisco Bay region

Earthquake simulation on synthetic fault networks carries great potential for characterizing the statistical patterns of earthquake occurrence. I present an earthquake simulator based on elastic dislocation theory. It accounts for the effects of interseismic tectonic loading, static stress steps at the time of earthquakes, and postearthquake stress readjustment through viscoelastic...
Authors
Fred F. Pollitz

Dietary flexibility in three representative waterbirds across salinity and depth gradients in salt ponds of San Francisco Bay Dietary flexibility in three representative waterbirds across salinity and depth gradients in salt ponds of San Francisco Bay

Salt evaporation ponds have existed in San Francisco Bay, California, for more than a century. In the past decade, most of the salt ponds have been retired from production and purchased for resource conservation with a focus on tidal marsh restoration. However, large numbers of waterbirds are found in salt ponds, especially during migration and wintering periods. The value of these...
Authors
John Y. Takekawa, A.K. Miles, D. C. Tsao-Melcer, D. H. Schoellhamer, S. Fregien, N.D. Athearn

Mercury bioaccumulation and risk to three waterbird foraging guilds is influenced by foraging ecology and breeding stage Mercury bioaccumulation and risk to three waterbird foraging guilds is influenced by foraging ecology and breeding stage

We evaluated mercury (Hg) in five waterbird species representing three foraging guilds in San Francisco Bay, CA. Fish-eating birds (Forster's and Caspian terns) had the highest Hg concentrations in thier tissues, but concentrations in an invertebrate-foraging shorebird (black-necked stilt) were also elevated. Foraging habitat was important for Hg exposure as illustrated by within-guild...
Authors
Collin A. Eagles-Smith, Joshua T. Ackerman, S.E.W. de la Cruz, John Y. Takekawa

Integrating terrestrial LiDAR and stereo photogrammetry to map the Tolay lakebed in northern San Francisco Bay Integrating terrestrial LiDAR and stereo photogrammetry to map the Tolay lakebed in northern San Francisco Bay

The Tolay Creek Watershed drains approximately 3,520 ha along the northern edge of San Francisco Bay. Surrounded by a mosaic of open space conservation easements and public wildlife areas, it is one of the only watersheds in this urbanized estuary that is protected from its headwaters to the bay. Tolay Lake is a seasonal, spring-fed lake found in the upper watershed that historically...
Authors
Isa Woo, Rune Storesund, John Y. Takekawa, Rachel J. Gardiner, Steve Ehret

Potential effects of mercury on threatened California black rails Potential effects of mercury on threatened California black rails

San Francisco Bay (SFB) estuary sediments contain high levels of mercury (Hg), and tidal marsh resident species may be vulnerable to Hg contamination. We examined Hg concentrations in California black rails, a threatened waterbird species that inhabits SFB tidal salt marshes. We captured 127 black rails during the prebreeding and postbreeding seasons and examined the influence of site...
Authors
Danika C. Tsao, A. Keith Miles, John Y. Takekawa, Isa Woo

Rapid changes in small fish mercury concentrations in estuarine wetlands: Implications for wildlife risk and monitoring programs Rapid changes in small fish mercury concentrations in estuarine wetlands: Implications for wildlife risk and monitoring programs

Small fish are commonly used to assess mercury (Hg) risk to wildlife and monitor Hg in wetlands. However, limited research has evaluated short-term Hg variability in small fish, which can have important implications for monitoring programs and risk assessment. We conducted a time-series study of Hg concentrations in two small fish species representing benthic (longjaw mudsuckers...
Authors
Collin A. Eagles-Smith, Joshua T. Ackerman

Data from theodolite measurements of creep rates on San Francisco Bay region faults, California Data from theodolite measurements of creep rates on San Francisco Bay region faults, California

Introduction Our purpose is to annually update our creep-data archive on San Francisco Bay region active faults for use by the scientific research community. Earlier data (1979-2001) were reported in Galehouse (2002) and were analyzed and described in detail in a summary report (Galehouse and Lienkaemper, 2003). A complete analysis of our earlier results obtained on the Hayward Fault was...
Authors
Forrest S. McFarland, James J. Lienkaemper, S. John Caskey

Mercury concentrations and loads in a large river system tributary to San Francisco Bay, California, USA Mercury concentrations and loads in a large river system tributary to San Francisco Bay, California, USA

In order to estimate total mercury (HgT) loads entering San Francisco Bay, USA, via the Sacramento-San Joaquin River system, unfiltered water samples were collected between January 2002 and January 2006 during high flow events and analyzed for HgT. Unfiltered HgT concentrations ranged from 3.2 to 75 ng/L and showed a strong correlation (r2 = 0.8, p 0.001, n = 78) to suspended sediment
Authors
N. David, L.J. McKee, F.J. Black, A.R. Flegal, C.H. Conaway, D. H. Schoellhamer, N. K. Ganju

Sediment deposition, erosion, and bathymetric change in central San Francisco Bay: 1855-1979 Sediment deposition, erosion, and bathymetric change in central San Francisco Bay: 1855-1979

Central San Francisco Bay is the hub of a dynamic estuarine system connecting the San Joaquin and Sacramento River Deltas, Suisun Bay, and San Pablo Bay to the Pacific Ocean and South San Francisco Bay. To understand the role that Central San Francisco Bay plays in sediment transport throughout the system, it is necessary to first determine historical changes in patterns of sediment...
Authors
Theresa A. Fregoso, Amy C. Foxgrover, Bruce E. Jaffe
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