The movement and transmission of avian influenza viruses in wild birds may differ by the migratory nature of each host species.
Return to Ecosystems >> Wildlife Disease and Environmental Health >> Avian Influenza
Mallard
The movement and transmission of avian influenza viruses in wild birds may differ by the migratory nature of each host species. USGS research examined migration patterns of mallards and northern pintails and found that mallards appear less likely to make migratory flights between Alaska and Asia. Thus, mallards are less likely to transfer Asian origin viruses directly to North America via Alaska. However, mallards may be acommon species to transmit avian influenza viruses once infected.

Blue-winged Teal and H7 avian influenza
Many blue-winged teal winter in the Neotropics and breed in southern Canada. Thus, the migratory routes of this species are a potential pathway for infectious agents to move between the Neotropics and North America. For example, H7 subtype influenza viruses, which have important implications for domestic animal and human health, are seasonally abundant in blue-winged teal in spring. Although preliminary data suggest that these viruses do not contain South American types of viruses, it remains unclear if teal are transporting H7 viruses from Neotropic wintering areas (e.g. Columbia, Guatemala, and Mexico) into the United States and which locations may be at highest risk for the introduction of viruses. Using a combination of satellite telemetry and genomic sequencing of influenza viruses, this project investigates the intercontinental movement of hosts and viruses between the United States and the Neotropics. Results will provide information to optimize surveillance efforts for the introduction of avian pathogens into the southern United States and generate information that may be used to improve biosecurity of poultry production facilities in this region.

Northern Pintail
Early on, the USGS identified the Northern Pintail as a model species to test the hypothesis that wild birds play a role in the dispersal of avian influenza viruses between continents. Northern Pintails are one of the most common waterfowl species, breeding throughout high latitudes of Russian and Alaska and wintering throughout Asia and the lower-48 U.S. USGS research in the U.S. and Japan determined Northern Pintails are highly migratory, with satellite telemetry and band recovery data finding movement of pintails between East Asia and North America. Population genetic and banding data demonstrated that East Asia and Pacific U.S. populations are essentially one group that partially overlaps in northeastern Russia during the summer. In 2008, the USGS conducted genetic sequencing of avian influenza viruses isolated from pintails in Alaska and revealed a high frequency of Eurasian genes, suggesting viral gene flow between Asian and North America (See Koehler et al. 2008). Ongoing USGS Alaska Science Center research continues to provide support for maintaining Northern Pintails as a species of interest in surveillance efforts for foreign-origin pathogens into North America.
Tundra Swan
Because Tundra Swans are potentially susceptible to highly pathogenic avian influenza virus, we sought to better understand the migration of Tundra Swans throughout North America. This project documents population differences in migration patterns and wintering distribution of Tundra Swans that breed across Alaska. A total of 50 Tundra Swans were fitted with satellite transmitters (PTT) at five different breeding areas in Alaska, including the southern and northern Alaska Peninsula, the Yukon-Kuskokwim Delta, drainages of Kotzebue Sound, and the Arctic Coastal Plain. An understanding of population-specific movement patterns of this widespread species will facilitate management of wildlife and domestic poultry populations and improve our understanding of the role of migratory birds in the redistribution of pathogens and contaminants.
Shorebirds
Shorebirds are a reservoir of avian influenza viruses and long-distance migrants, often crossing large distances in a single flight. As many as 20 shorebird species that visit North America in summer have migratory routes through Asia that overlap with past outbreak areas of highly pathogenic avian influenza. Thus, from a migratory perspective shorebirds constitute an important taxonomic group for avian influenza surveillance sampling in North America. However, few shorebirds have tested positive for avian influenza on the west coast of North America, in stark contrast to the Atlantic coast where prevalence is higher. USGS research demonstrated the shorebirds should not likely be considered a high priority for future avian influenza sampling on the west coast of the U.S. due to their low prevalence of viruses.
Gulls
Gulls are a common reservoir species for avian influenza viruses and have been a high priority species to sample for pathogens because populations in western Alaska are thought to migrate to Asia for winter and thus have connections with outbreak areas of highly pathogenic avian influenza. However, little is known about the migratory routes of gulls from northern and western Alaska. Additionally, gulls are scavengers of dead animals and at landfills and may thus be a disease dispersal species, moving pathogens between wildlife and human environments. The USGS Alaska Science Center is examining the prevalence and diversity of avian influenza in gulls each year through surveillance sampling. Research is also examining how other marine birds may play a role in the maintenance and dispersal of avian influenza viruses.
Below are other science projects associated with this project.
Avian Influenza Research
High Priority Species for Avian Influenza in Alaska
Below are publications associated with this project.
Low-pathogenic influenza A viruses in North American diving ducks contribute to the emergence of a novel highly pathogenic influenza A(H7N8) virus
Optimizing surveillance for South American origin influenza A viruses along the United States Gulf Coast through genomic characterization of isolates from blue-winged teal (Anas discors)
Dispersal of H9N2 influenza A viruses between East Asia and North America by wild birds
Serologic evidence of influenza A (H14) virus introduction into North America
Evidence for seasonal patterns in the relative abundance of avian influenza virus subtypes in blue-winged teal (Anas discors)
Avian influenza virus antibodies in Pacific Coast Red Knots (Calidris canutus rufa)
Genomic characterization of H14 subtype influenza A viruses in New World waterfowl and experimental infectivity in mallards Anas platyrhynchos
Blood lead concentrations in Alaskan tundra swans: linking breeding and wintering areas with satellite telemetry
Antibodies to H5 subtype avian influenza virus and Japanese encephalitis virus in northern pintails (Anas acuta) sampled in Japan
Evidence that life history characteristics of wild birds influence infection rates and exposure to influenza A viruses
Variation in spring migration routes and breeding distribution of northern pintails Anas acuta that winter in Japan
Limited evidence of trans-hemispheric movement of avian influenza viruses among contemporary North American shorebird isolates
- Overview
The movement and transmission of avian influenza viruses in wild birds may differ by the migratory nature of each host species.
Return to Ecosystems >> Wildlife Disease and Environmental Health >> Avian Influenza
Mallard Duck swimming(Credit: Andrew Reeves, USGS. Public domain.) Mallard
The movement and transmission of avian influenza viruses in wild birds may differ by the migratory nature of each host species. USGS research examined migration patterns of mallards and northern pintails and found that mallards appear less likely to make migratory flights between Alaska and Asia. Thus, mallards are less likely to transfer Asian origin viruses directly to North America via Alaska. However, mallards may be acommon species to transmit avian influenza viruses once infected.
Sources/Usage: Some content may have restrictions. Visit Media to see details.Blue-winged Teal over water with a satellite transmitter.(Credit: Jonas Bonnedahl. Limited Use by USGS ASC only.) Blue-winged Teal and H7 avian influenza
Many blue-winged teal winter in the Neotropics and breed in southern Canada. Thus, the migratory routes of this species are a potential pathway for infectious agents to move between the Neotropics and North America. For example, H7 subtype influenza viruses, which have important implications for domestic animal and human health, are seasonally abundant in blue-winged teal in spring. Although preliminary data suggest that these viruses do not contain South American types of viruses, it remains unclear if teal are transporting H7 viruses from Neotropic wintering areas (e.g. Columbia, Guatemala, and Mexico) into the United States and which locations may be at highest risk for the introduction of viruses. Using a combination of satellite telemetry and genomic sequencing of influenza viruses, this project investigates the intercontinental movement of hosts and viruses between the United States and the Neotropics. Results will provide information to optimize surveillance efforts for the introduction of avian pathogens into the southern United States and generate information that may be used to improve biosecurity of poultry production facilities in this region.
Sources/Usage: Public Domain. Visit Media to see details.Northern Pintail Duck swimming in a lake(Credit: Brian Guzzetti, USGS. Public domain.) Northern Pintail
Early on, the USGS identified the Northern Pintail as a model species to test the hypothesis that wild birds play a role in the dispersal of avian influenza viruses between continents. Northern Pintails are one of the most common waterfowl species, breeding throughout high latitudes of Russian and Alaska and wintering throughout Asia and the lower-48 U.S. USGS research in the U.S. and Japan determined Northern Pintails are highly migratory, with satellite telemetry and band recovery data finding movement of pintails between East Asia and North America. Population genetic and banding data demonstrated that East Asia and Pacific U.S. populations are essentially one group that partially overlaps in northeastern Russia during the summer. In 2008, the USGS conducted genetic sequencing of avian influenza viruses isolated from pintails in Alaska and revealed a high frequency of Eurasian genes, suggesting viral gene flow between Asian and North America (See Koehler et al. 2008). Ongoing USGS Alaska Science Center research continues to provide support for maintaining Northern Pintails as a species of interest in surveillance efforts for foreign-origin pathogens into North America.
Tundra Swan swimming on a lake in northern Alaska.(Credit: Ryan Askren, USGS. Public domain.) Tundra Swan
Because Tundra Swans are potentially susceptible to highly pathogenic avian influenza virus, we sought to better understand the migration of Tundra Swans throughout North America. This project documents population differences in migration patterns and wintering distribution of Tundra Swans that breed across Alaska. A total of 50 Tundra Swans were fitted with satellite transmitters (PTT) at five different breeding areas in Alaska, including the southern and northern Alaska Peninsula, the Yukon-Kuskokwim Delta, drainages of Kotzebue Sound, and the Arctic Coastal Plain. An understanding of population-specific movement patterns of this widespread species will facilitate management of wildlife and domestic poultry populations and improve our understanding of the role of migratory birds in the redistribution of pathogens and contaminants.
Ruddy Turnstone(Credit: Ryan Askren, USGS. Public domain.) Shorebirds
Shorebirds are a reservoir of avian influenza viruses and long-distance migrants, often crossing large distances in a single flight. As many as 20 shorebird species that visit North America in summer have migratory routes through Asia that overlap with past outbreak areas of highly pathogenic avian influenza. Thus, from a migratory perspective shorebirds constitute an important taxonomic group for avian influenza surveillance sampling in North America. However, few shorebirds have tested positive for avian influenza on the west coast of North America, in stark contrast to the Atlantic coast where prevalence is higher. USGS research demonstrated the shorebirds should not likely be considered a high priority for future avian influenza sampling on the west coast of the U.S. due to their low prevalence of viruses.
Glaucous-winged Gull flying near the Aleutian Islands, Alaska.(Credit: Sarah Schoen, USGS. Public domain.) Gulls
Gulls are a common reservoir species for avian influenza viruses and have been a high priority species to sample for pathogens because populations in western Alaska are thought to migrate to Asia for winter and thus have connections with outbreak areas of highly pathogenic avian influenza. However, little is known about the migratory routes of gulls from northern and western Alaska. Additionally, gulls are scavengers of dead animals and at landfills and may thus be a disease dispersal species, moving pathogens between wildlife and human environments. The USGS Alaska Science Center is examining the prevalence and diversity of avian influenza in gulls each year through surveillance sampling. Research is also examining how other marine birds may play a role in the maintenance and dispersal of avian influenza viruses.
- Science
Below are other science projects associated with this project.
Avian Influenza Research
Since 2006, the USGS Alaska Science Center has been part of the State and Federal interagency team for the detection and response to highly pathogenic (HPAI) viruses in North America. Avian influenza or "bird flu" is a viral disease that primarily infects domestic poultry and wild birds. Avian influenza viruses are naturally occurring in wild birds such as ducks, geese, swans, and gulls. These...High Priority Species for Avian Influenza in Alaska
In early 2006, an Alaska Interagency Avian Influenza Working Group was formed to develop a ranking matrix for selecting priority species to be sampled within Alaska. Most wild bird species with populations that utilize areas of both Alaska and Asia were identified and considered in the ranking exercise. Based on scoring criteria, 28 target species were chosen for sampling. Alaska is a... - Publications
Below are publications associated with this project.
Filter Total Items: 17Low-pathogenic influenza A viruses in North American diving ducks contribute to the emergence of a novel highly pathogenic influenza A(H7N8) virus
Introductions of low-pathogenic avian influenza (LPAI) viruses of subtypes H5 and H7 into poultry from wild birds have the potential to mutate to highly pathogenic avian influenza (HPAI) viruses, but such viruses' origins are often unclear. In January 2016, a novel H7N8 HPAI virus caused an outbreak in turkeys in Indiana, USA. To determine the virus's origin, we sequenced the genomes of 441 wild-bAuthorsYifei Xu, Andrew M. Ramey, Andrew S. Bowman, Thomas J. DeLiberto, Mary L. Killian, Scott Krauss, Jacqueline M. Nolting, Mia Kim Torchetti, Andrew B. Reeves, Richard J. Webby, David E. Stallknecht, Xiu-Feng WanOptimizing surveillance for South American origin influenza A viruses along the United States Gulf Coast through genomic characterization of isolates from blue-winged teal (Anas discors)
Relative to research focused on intercontinental viral exchange between Eurasia and North America, less attention has been directed towards understanding the redistribution of influenza A viruses (IAVs) by wild birds between North America and South America. In this study, we genomically characterized 45 viruses isolated from blue-winged teal (Anas discors) along the Texas and Louisiana Gulf CoastAuthorsAndrew M. Ramey, Patrick Walther, Paul Karl Link, Rebecca L. Poulson, Benjamin R. Wilcox, George M. Newsome, Erica Spackman, J. Brown, David E. StallknechtDispersal of H9N2 influenza A viruses between East Asia and North America by wild birds
Samples were collected from wild birds in western Alaska to assess dispersal of influenza A viruses between East Asia and North America. Two isolates shared nearly identical nucleotide identity at eight genomic segments with H9N2 viruses isolated from China and South Korea providing evidence for intercontinental dispersal by migratory birds.AuthorsAndrew M. Ramey, Andrew B. Reeves, Sarah A. Sonsthagen, Joshua L. Teslaa, Sean W. Nashold, Tyrone F. Donnelly, Bruce Casler, Jeffrey S. HallSerologic evidence of influenza A (H14) virus introduction into North America
Although a diverse population of influenza A viruses (IAVs) is maintained among ducks, geese, shorebirds, and gulls, not all of the 16 avian hemagglutinin (HA) subtypes are equally represented (1). The 14th HA subtype, commonly known as the H14 subtype, was historically limited to isolates from the former Soviet Union in the 1980s (2) and was not subsequently detected until 2010, when isolated inAuthorsNeus Latorre-Margalef, Andrew M. Ramey, Alinde Fojtik, David E. StallknechtEvidence for seasonal patterns in the relative abundance of avian influenza virus subtypes in blue-winged teal (Anas discors)
Seasonal dynamics of influenza A viruses (IAVs) are driven by host density and population immunity. Through an analysis of subtypic data for IAVs isolated from Blue-winged Teal (Anas discors), we present evidence for seasonal patterns in the relative abundance of viral subtypes in spring and summer/autumn.AuthorsAndrew M. Ramey, Rebecca L. Poulson, Ana S. González-Reiche, Benjamin R. Wilcox, Patrick Walther, Paul Link, Deborah L. Carter, George M. Newsome, Maria L. Müller, Roy D. Berghaus, Daniel R. Perez, Jeffrey S. Hall, David E. StallknechtAvian influenza virus antibodies in Pacific Coast Red Knots (Calidris canutus rufa)
Prevalence of avian influenza virus (AIV) antibodies in the western Atlantic subspecies of Red Knot (Calidris canutus rufa) is among the highest for any shorebird. To assess whether the frequency of detection of AIV antibodies is high for the species in general or restricted only to C. c. rufa, we sampled the northeastern Pacific Coast subspecies of Red Knot (Calidris canutus roselaari) breeding iAuthorsJames A. Johnson, Lucas H. DeCicco, Daniel R. Ruthrauff, Scott Krauss, Jeffrey S. HallGenomic characterization of H14 subtype influenza A viruses in New World waterfowl and experimental infectivity in mallards Anas platyrhynchos
Recent repeated isolation of H14 hemagglutinin subtype influenza A viruses (IAVs) in the New World waterfowl provides evidence to suggest that host and/or geographic ranges for viruses of this subtype may be expanding. In this study, we used genomic analyses to gain inference on the origin and evolution of H14 viruses in New World waterfowl and conducted an experimental challenge study in mallardsAuthorsAndrew M. Ramey, Rebecca L. Poulson, Ana S. Gonzalez-Reiche, Daniel R. Perez, David E. Stalknecht, Justin D. BrownBlood lead concentrations in Alaskan tundra swans: linking breeding and wintering areas with satellite telemetry
Tundra swans (Cygnus columbianus) like many waterfowl species are susceptible to lead (Pb) poisoning, and Pb-induced mortality has been reported from many areas of their wintering range. Little is known however about Pb levels throughout the annual cycle of tundra swans, especially during summer when birds are on remote northern breeding areas where they are less likely to be exposed to anthropogeAuthorsCraig R. Ely, Christian FransonAntibodies to H5 subtype avian influenza virus and Japanese encephalitis virus in northern pintails (Anas acuta) sampled in Japan
Blood samples from 105 northern pintails (Anas acuta) captured on Hokkaido, Japan were tested for antibodies to avian influenza virus (AIV), Japanese encephalitis virus (JEV), and West Nile virus (WNV) to assess possible involvement of this species in the spread of economically important and potentially zoonotic pathogens. Antibodies to AIV were detected in 64 of 105 samples (61%). Of the 64 positAuthorsAndrew M. Ramey, Erica Spackman, Jung-Yong Yeh, Go Fujita, Kan Konishi, Kiyoshi Uchida, John A. Reed, Benjamin R. Wilcox, Justin D. Brown, David E. StallknechtEvidence that life history characteristics of wild birds influence infection rates and exposure to influenza A viruses
We report on life history characteristics, temporal, and age-related effects influencing the frequency of occurrence of avian influenza (AI) viruses in four species of migratory geese breeding on the Yukon-Kuskokwim Delta, Alaska. Emperor geese (Chen canagica), cackling geese (Branta hutchinsii), greater white-fronted geese (Anser albifrons), and black brant (Branta bernicla), were all tested forAuthorsCraig R. Ely, Jeffrey S. Hall, Joel A. Schmutz, John M. Pearce, John Terenzi, James S. Sedinger, Hon S. IpVariation in spring migration routes and breeding distribution of northern pintails Anas acuta that winter in Japan
In North America, spring migration routes and breeding distribution of northern pintails Anas acuta vary because some individuals opportunistically nest at mid-latitudes in years when ephemeral prairie wetlands are available, whereas others regularly nest in arctic and sub-arctic regions where wetland abundance is more constant. Less was known about migration routes and breeding distribution of piAuthorsJerry W. Hupp, Noriyuki Yamaguchi, Paul L. Flint, John M. Pearce, Ken-ichi Tokita, Tetsuo Shimada, Andrew M. Ramey, Sergei Kharitonov, Hiroyoshi HiguchiLimited evidence of trans-hemispheric movement of avian influenza viruses among contemporary North American shorebird isolates
Migratory routes of gulls, terns, and shorebirds (Charadriiformes) are known to cross hemispheric boundaries and intersect with outbreak areas of highly pathogenic avian influenza (HPAI). Prior assessments of low pathogenic avian influenza (LPAI) among species of this taxonomic order found some evidence for trans-hemispheric movement of virus genes. To specifically clarify the role of shorebird spAuthorsJohn M. Pearce, Andrew M. Ramey, Hon S. Ip, Robert E. Gill