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Publications

Below is a list of available NOROCK peer reviewed and published science. If you are in search of a specific publication and cannot find it below or through a search, please contact twojtowicz@usgs.gov.

Filter Total Items: 1316

Consequences of actively managing a small Bull Trout population in a fragmented landscape Consequences of actively managing a small Bull Trout population in a fragmented landscape

Habitat fragmentation, which affects many native salmonid species, is one of the major factors contributing to the declines in distribution and abundance of Bull Trout Salvelinus confluentus. Increasingly, managers are considering options to maintain and enhance the persistence of isolated local populations through active management strategies. Understanding the ecological consequences...
Authors
Robert K. Al-Chokhachy, Sean Moran, Peter McHugh, Shana Bernall, Wade Fredenberg, Joseph M. DosSantos

Rapid growth and genetic diversity retention in an isolated reintroduced black bear population in the central appalachians Rapid growth and genetic diversity retention in an isolated reintroduced black bear population in the central appalachians

Animal reintroductions are important tools of wildlife management to restore species to their historical range, and they can also create unique opportunities to study population dynamics and genetics from founder events. We used non-invasive hair sampling in a systematic, closed-population capture-mark-recapture (CMR) study design at the Big South Fork (BSF) area in Kentucky during 2010...
Authors
Sean M. Murphy, John J. Cox, Joseph D. Clark, Benjamin J. Augustine, John T. Hast, Dan Gibbs, Michael Strunk, Steven Dobey

Assessing the components of adaptive capacity to improve conservation and management efforts under global change Assessing the components of adaptive capacity to improve conservation and management efforts under global change

Natural-resource managers and other conservation practitioners are under unprecedented pressure to categorize and quantify the vulnerability of natural systems based on assessment of the exposure, sensitivity, and adaptive capacity of species to climate change. Despite the urgent need for these assessments, neither the theoretical basis of adaptive capacity nor the practical issues...
Authors
Adrienne Nicotra, Erik A. Beever, Amanda Robertson, Gretchen Hofmann, John O’Leary

Evaluating physical habitat and water chemistry data from statewide stream monitoring programs to establish least-impacted conditions in Washington State Evaluating physical habitat and water chemistry data from statewide stream monitoring programs to establish least-impacted conditions in Washington State

Various GIS-generated land-use predictor variables, physical habitat metrics, and water chemistry variables from 75 reference streams and 351 randomly sampled sites throughout Washington State were evaluated for effectiveness at discriminating reference from random sites within level III ecoregions. A combination of multivariate clustering and ordination techniques were used. We describe...
Authors
Siri K. Wilmoth, Kathryn M. Irvine, Chad Larson

Presence and abundance of non-native plant species associated with recent energy development in the Williston Basin Presence and abundance of non-native plant species associated with recent energy development in the Williston Basin

The Williston Basin, located in the Northern Great Plains, is experiencing rapid energy development with North Dakota and Montana being the epicenter of current and projected development in the USA. The average single-bore well pad is 5 acres with an estimated 58,485 wells in North Dakota alone. This landscape-level disturbance may provide a pathway for the establishment of non-native...
Authors
Todd M. Preston

Empirical evaluation of the conceptual model underpinning a regional aquatic long-term monitoring program using causal modelling Empirical evaluation of the conceptual model underpinning a regional aquatic long-term monitoring program using causal modelling

Conceptual models are an integral facet of long-term monitoring programs. Proposed linkages between drivers, stressors, and ecological indicators are identified within the conceptual model of most mandated programs. We empirically evaluate a conceptual model developed for a regional aquatic and riparian monitoring program using causal models (i.e., Bayesian path analysis). We assess...
Authors
Kathryn M. Irvine, Scott Miller, Robert K. Al-Chokhachy, Erik Archer, Brett B. Roper, Jeffrey L. Kershner

Experimental flights using a small unmanned aircraft system for mapping emergent sandbars Experimental flights using a small unmanned aircraft system for mapping emergent sandbars

The US Geological Survey and Parallel Inc. conducted experimental flights with the Tarantula Hawk (T-Hawk) unmanned aircraft system (UAS ) at the Dyer and Cottonwood Ranch properties located along reaches of the Platte River near Overton, Nebraska, in July 2013. We equipped the T-Hawk UAS platform with a consumer-grade digital camera to collect imagery of emergent sandbars in the reaches...
Authors
Paul J. Kinzel, Mark A. Bauer, Mark R. Feller, Christopher Holmquist-Johnson, Todd Preston

Risk assessment of brine contamination to aquatic resources from energy development in glacial drift deposits: Williston Basin, USA Risk assessment of brine contamination to aquatic resources from energy development in glacial drift deposits: Williston Basin, USA

Contamination to aquatic resources from co-produced water (brine) associated with energy development has been documented in the northeastern portion of the Williston Basin; an area mantled by glacial drift. The presence and magnitude of brine contamination can be determined using the contamination index (CI) value from water samples. Recently, the U.S. Geological Survey published a...
Authors
Todd M. Preston, Tara L. Chesley-Preston

Landscape community genomics: understanding eco-evolutionary processes in complex environments Landscape community genomics: understanding eco-evolutionary processes in complex environments

Extrinsic factors influencing evolutionary processes are often categorically lumped into interactions that are environmentally (e.g., climate, landscape) or community-driven, with little consideration of the overlap or influence of one on the other. However, genomic variation is strongly influenced by complex and dynamic interactions between environmental and community effects. Failure...
Authors
Brian K. Hand, Winsor H. Lowe, Ryan P. Kovach, Clint C. Muhlfeld, Gordon Luikart

Population genetic structure and disease in montane boreal toads: More heterozygous individuals are more likely to be infected with amphibian chytrid Population genetic structure and disease in montane boreal toads: More heterozygous individuals are more likely to be infected with amphibian chytrid

Amphibians are more threatened than any other vertebrate group, with 41 % of species classified as threatened. The causes of most declines are not well understood, though many declines have been linked to disease. Additionally, amphibians are physiologically constrained to moist habitats and considered poor dispersers; thus, they may suffer genetic consequences of population isolation...
Authors
Brett Addis, Winsor Lowe, Blake R. Hossack, Fred Allendorf

Glacier-derived August runoff in northwest Montana Glacier-derived August runoff in northwest Montana

The second largest concentration of glaciers in the U.S. Rocky Mountains is located in Glacier National Park (GNP), Montana. The total glacier-covered area in this region decreased by ∼35% over the past 50 years, which has raised substantial concern about the loss of the water derived from glaciers during the summer. We used an innovative weather station design to collect in situ...
Authors
Adam Clark, Joel T. Harper, Daniel B. Fagre

Genomics and introgression: Discovery and mapping of thousands of species-diagnostic SNPs using RAD sequencing Genomics and introgression: Discovery and mapping of thousands of species-diagnostic SNPs using RAD sequencing

Invasive hybridization and introgression pose a serious threat to the persistence of many native species. Understanding the effects of hybridization on native populations (e.g., fitness consequences) requires numerous species-diagnostic loci distributed genome-wide. Here we used RAD sequencing to discover thousands of single-nucleotide polymorphisms (SNPs) that are diagnostic between...
Authors
Brian K. Hand, Tyler D Hether, Ryan P. Kovach, Clint C. Muhlfeld, Stephen J. Amish, Matthew C. Boyer, Sean M. O’Rourke, Michael R. Miller, Winsor H. Lowe, Paul A. Hohenlohe, Gordon Luikart
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